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(-) Description

Title :  NMR STRUCTURE OF THE MYRISTYLATED FELINE IMMUNODEFICIENCY VIRUS MATRIX PROTEIN
 
Authors :  L. A. Brown, C. Cox, R. J. Button, J. Baptiste, K. Bahlow, V. Spurrier, B. L. Kuo, E. O. Freed, M. F. Summers, J. Kyser, H. R. Summers
Date :  15 Apr 15  (Deposition) - 27 May 15  (Release) - 27 May 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Myristoylated, Fiv, Hiv, Siv, Feline, Matrix, P15, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. A. Brown, C. Cox, J. Baptiste, H. Summers, R. Button, K. Bahlow, V. Spurrier, J. Kyser, B. G. Luttge, L. Kuo, E. O. Freed, M. F. Summers
Nmr Structure Of The Myristylated Feline Immunodeficiency Virus Matrix Protein.
Viruses V. 7 2210 2015
PubMed-ID: 25941825  |  Reference-DOI: 10.3390/V7052210

(-) Compounds

Molecule 1 - MATRIX PROTEIN P15
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3) RIL
    Expression System Taxid: 469008
    Expression System Vector: PET11/PET17
    Expression System Vector Type: PLASMID
    Gene: GAG
    Mutation: YES
    Organism Common: FIV
    Organism Scientific: FELINE IMMUNODEFICIENCY VIRUS (ISOLATE PETALUMA)
    Organism Taxid: 11674
    Strain: PETALUMA STRAIN
    Variant: CLONE 34TF10

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1MYR1Mod. Amino AcidMYRISTIC ACID
NMR Structure * (1, 1)
No.NameCountTypeFull Name
1MYR1Mod. Amino AcidMYRISTIC ACID

(-) Sites  (0, 0)

(no "Site" information available for 2N1R)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N1R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N1R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N1R)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2N1R)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhh.............hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2n1r A   1 xGNGASRDWKMAIKRCSNVAVGVGGKSKKFGEGNFRWAIRMANVSTGREPGDIPETLDQLRLVICDLQERREKFGSSKEIDMAIVTLKVFAVAGLLNMTVSTAAAAENMYSQMGLDTRPSMKEAGGKEEGPPQAY 135
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130     
                            |                                                                                                                                      
                            1-MYR
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N1R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N1R)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N1R)

(-) Gene Ontology  (11, 11)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GAG_FIVPE | P16087: 4ic9 4ica 5dck

(-) Related Entries Specified in the PDB File

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