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(-) Description

Title :  NMR STRUCTURE OF AN ODIN-SAM1 FRAGMENT
 
Authors :  F. A. Mercurio, M. Leone
Date :  30 Jan 15  (Deposition) - 08 Jul 15  (Release) - 05 Aug 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. A. Mercurio, C. Di Natale, L. Pirone, P. L. Scognamiglio, D. Marasco, E. M. Pedone, M. Saviano, M. Leone
Peptide Fragments Of Odin-Sam1: Conformational Analysis And Interaction Studies With Epha2-Sam.
Chembiochem V. 16 1629 2015
PubMed-ID: 26120079  |  Reference-DOI: 10.1002/CBIC.201500197

(-) Compounds

Molecule 1 - ANKYRIN REPEAT AND SAM DOMAIN-CONTAINING PROTEIN 1A
    ChainsA
    EngineeredYES
    FragmentSAM 1 DOMAIN RESIDUES 715-757
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymODIN
    SyntheticYES

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP
NMR Structure * (2, 2)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 2MYQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MYQ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MYQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MYQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MYQ)

(-) Exons   (0, 0)

(no "Exon" information available for 2MYQ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:45
                                                                            
               SCOP domains --------------------------------------------- SCOP domains
               CATH domains --------------------------------------------- CATH domains
               Pfam domains --------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------- PROSITE
                 Transcript --------------------------------------------- Transcript
                  2myq A  1 xSKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARx 45
                            |       10        20        30        40    |
                            |                                          45-NH2
                            1-ACE                                        

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MYQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MYQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MYQ)

(-) Gene Ontology  (8, 8)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANS1A_HUMAN | Q926252lmr

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2MYQ)