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(-) Description

Title :  MEMBRANE INDUCED STRUCTURE OF NOVEL HUMAN TACHYKININ HEMOKININ-1 (HHK1)
 
Authors :  A. Ganjiwale, S. Cowsik
Date :  24 Apr 14  (Deposition) - 27 May 15  (Release) - 27 May 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Tachykinin, Neuropeptide (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Ganjiwale, S. Cowsik
Membrane Induced Structure Of Novel Human Tachykinin Hemokinin-1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TACHYKININ-4
    ChainsA
    EngineeredYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsCUSTOM SYNTHESIZED PEPTIDE WITH >99% PURITY
    SynonymENDOKININ-A/B
    SyntheticYES

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:11
 aligned with TKN4_HUMAN | Q86UU9 from UniProtKB/Swiss-Prot  Length:113

    Alignment length:11
                                    66 
            TKN4_HUMAN   57 TGKASQFFGLM 67
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                  2moc A  1 TGKASQFFGLM 11
                                    10 

   Legend:   → Mismatch (orange background)
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 Classification and Annotation

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(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)
Chain A   (TKN4_HUMAN | Q86UU9)
molecular function
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
    GO:0007267    cell-cell signaling    Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
    GO:0006954    inflammatory response    The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
    GO:0007204    positive regulation of cytosolic calcium ion concentration    Any process that increases the concentration of calcium ions in the cytosol.
    GO:0046878    positive regulation of saliva secretion    Any process that activates or increases the frequency, rate or extent of the regulated release of saliva.
    GO:0008217    regulation of blood pressure    Any process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.
    GO:0007217    tachykinin receptor signaling pathway    The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

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