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(-) Description

Title :  THE SOLUTION STRUCTURE OF THEROMACIN
 
Authors :  S. Jung, F. D. Soennichsen, C. -W. Hung, A. Tholey, C. Boidin-Wichlacz, W. Hausgen, C. Gelhaus, C. Desel, R. Podschun, V. Watzig, A. Tasiemski M. Leippe, J. Groetzinger
Date :  20 Dec 11  (Deposition) - 14 Mar 12  (Release) - 19 Aug 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
NMR Structure *:  A  (1x)
Keywords :  Antimicrobial Peptide, Antimicrobial Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Jung, F. D. Sonnichsen, C. W. Hung, A. Tholey, C. Boidin-Wichlacz, W. Haeusgen, C. Gelhaus, C. Desel, R. Podschun, V. Waetzig, A. Tasiemski, M. Leippe, J. Grotzinger
Macin Family Of Antimicrobial Proteins Combines Antimicrobial And Nerve Repair Activities.
J. Biol. Chem. V. 287 14246 2012
PubMed-ID: 22396551  |  Reference-DOI: 10.1074/JBC.M111.336495

(-) Compounds

Molecule 1 - THEROMACIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET-32A
    Organism Common: MEDICINAL LEECH
    Organism Scientific: HIRUDO MEDICINALIS
    Organism Taxid: 6421

 Structural Features

(-) Chains, Units

  1
NMR Structure (10x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LN8)

(-) Sites  (0, 0)

(no "Site" information available for 2LN8)

(-) SS Bonds  (5, 5)

NMR Structure
No.Residues
1A:2 -A:47
2A:9 -A:39
3A:24 -A:57
4A:28 -A:59
5A:31 -A:73

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2LN8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2LN8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2LN8)

(-) Exons   (0, 0)

(no "Exon" information available for 2LN8)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:75
 aligned with THMAC_HIRME | A8I0L8 from UniProtKB/Swiss-Prot  Length:75

    Alignment length:75
                                    10        20        30        40        50        60        70     
           THMAC_HIRME    1 GCFEDWSRCSPSTASATGVLWRSCDSYCKVCFKADRGECYDSPSLNCPHRLPNNKQCRCINARTAKDNRNPTCWA 75
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh................hhhhhhhh....eeee.................eeee.........hhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                  2ln8 A  1 GCFEDWSRCSPSTASATGVLWRSCDSYCKVCFKADRGECYDSPSLNCPHRLPNNKQCRCINARTAKDNRNPTCWA 75
                                    10        20        30        40        50        60        70
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LN8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LN8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LN8)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (THMAC_HIRME | A8I0L8)
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  2ln8
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 Related Entries

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