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(-) Description

Title :  SOLUTION NMR STRUCTURE OF A FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM GIARDIA LAMBLIA, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE TARGET GILAA.00840.A
 
Authors :  G. W. Buchko, Seattle Structural Genomics Center For Infectious (Ssgcid)
Date :  29 Jul 11  (Deposition) - 17 Aug 11  (Release) - 18 Dec 13  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Infectious Disease, Isomerase, Giardiasis, Ssgcid, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. W. Buchko, S. N. Hewitt, W. C. Van Voorhis, P. J. Myler
Solution Structure Of A Putative Fkbp-Type Peptidyl-Propyl Cis-Trans Isomerase From Giardia Lamblia.
J. Biomol. Nmr V. 57 369 2013
PubMed-ID: 24293257  |  Reference-DOI: 10.1007/S10858-013-9797-8

(-) Compounds

Molecule 1 - FKBP
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector: AVA0421
    Gene: GL50803_10450
    Organism Scientific: GIARDIA LAMBLIA
    Organism Taxid: 184922
    Strain: ATCC 50803
    Synonym: FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LGO)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:130
 aligned with Q8I6M8_GIAIC | Q8I6M8 from UniProtKB/TrEMBL  Length:109

    Alignment length:130
                                                 1                                                                                                            
                                     -         - |       9        19        29        39        49        59        69        79        89        99       109
         Q8I6M8_GIAIC     - ---------------------MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 109
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........................eeeee............eeeeeeeee.....eee........eeee......hhhhhhhhhhh...eeeeeee....................eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2lgo A   1 MAHHHHHHMGTLEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LGO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LGO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LGO)

(-) Gene Ontology  (7, 7)

NMR Structure(hide GO term definitions)
Chain A   (Q8I6M8_GIAIC | Q8I6M8)
molecular function
    GO:0005528    FK506 binding    Interacting selectively and non-covalently with the 23-membered macrolide lactone FK506.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
biological process
    GO:0061077    chaperone-mediated protein folding    The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.
cellular component
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.

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