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(-) Description

Title :  NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF PUL89
 
Authors :  A. Couvreux, S. Hantz, R. Marquant, G. Champier, S. Alain, N. Morellet,
Date :  18 Aug 09  (Deposition) - 09 Jun 10  (Release) - 09 Jun 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Nhcmv, Pul89, Terminase, Protein Binding, Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Couvreux, S. Hantz, R. Marquant, G. Champier, S. Alain, N. Morellet, S. Bouaziz
Insight Into The Structure Of The Pul89 C-Terminal Domain Of The Human Cytomegalovirus Terminase Complex.
Proteins V. 78 1520 2010
PubMed-ID: 20099308  |  Reference-DOI: 10.1002/PROT.22669

(-) Compounds

Molecule 1 - DNA CLEAVAGE AND PACKAGING PROTEIN LARGE SUBUNIT, UL89
    Chains: A
    Engineered: YES
    Fragment: SEQUENCE DATABASE RESIDUES 568-635
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: DNA PACKAGING TERMINASE SUBUNIT 1
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KN8)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:68
 aligned with Q6RXE9_HCMV | Q6RXE9 from UniProtKB/TrEMBL  Length:674

    Alignment length:68
                                   577       587       597       607       617       627        
          Q6RXE9_HCMV   568 DQNHIEQPFYLMGRDKALAVEQFISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRVTLAEG 635
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains DNA_pack_C-2kn8A01 A:1-68                                            Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                 2kn8 A   1 DQNHIEQPFYLMGRDKALAVEQFISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRVTLAEG  68
                                    10        20        30        40        50        60
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KN8)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: P-loop_NTPase (1112)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (Q6RXE9_HCMV | Q6RXE9)
biological process
    GO:0006323    DNA packaging    Any process in which DNA and associated proteins are formed into a compact, orderly structure.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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