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(-) Description

Title :  SOLUTION NMR STRUCTURE OF HI0947 FROM HAEMOPHILUS INFLUENZAE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET IR123
 
Authors :  K. Ding, T. A. Ramelot, J. R. Cort, D. Wang, C. Nwosu, L. Owens, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, M. A. Kennedy, Northeast Structural Genomics Consortium (Nesg)
Date :  09 Sep 07  (Deposition) - 02 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  Homodimer, Helix, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Ding, T. A. Ramelot, J. R. Cort, D. Wang, C. Nwosu, L. Owens, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, M. A. Kennedy
Solution Nmr Structure Of Hi0947 From Haemophilus Influenzae.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UPF0352 PROTEIN HI0840
    Atcc: 51907
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: HI0840
    Organism Scientific: HAEMOPHILUS INFLUENZAE
    Organism Taxid: 727
    Strain: DSM 11121, KW20, RD

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:80
 aligned with Y840_HAEIN | P44897 from UniProtKB/Swiss-Prot  Length:72

    Alignment length:80
                                                                                                  72        
                                    10        20        30        40        50        60        70 |       -
            Y840_HAEIN    1 MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQAFSNSLINAVKTR--------  -
               SCOP domains d2juza1 A:1-72 Uncharacterized protein HI0840                           -------- SCOP domains
               CATH domains 2juzA00 A:1-80 YejL-like                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------- Transcript
                  2juz A  1 MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQAFSNSLINAVKTRLEHHHHHH 80
                                    10        20        30        40        50        60        70        80


Chain B from PDB  Type:PROTEIN  Length:80
 aligned with Y840_HAEIN | P44897 from UniProtKB/Swiss-Prot  Length:72

    Alignment length:80
                                                                                                  72        
                                    10        20        30        40        50        60        70 |       -
            Y840_HAEIN    1 MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQAFSNSLINAVKTR--------  -
               SCOP domains d2juzb_ B: Uncharacterized protein HI0840                                        SCOP domains
               CATH domains 2juzB00 B:1-80 YejL-like                                                         CATH domains
           Pfam domains (1) -------------------------DUF1414-2juzB01 B:26-69                     ----------- Pfam domains (1)
           Pfam domains (2) -------------------------DUF1414-2juzB02 B:26-69                     ----------- Pfam domains (2)
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------- Transcript
                  2juz B  1 MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQAFSNSLINAVKTRLEHHHHHH 80
                                    10        20        30        40        50        60        70        80
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 2)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 2)

NMR Structure
(-)
Clan: no clan defined [family: DUF1414] (5)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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