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(-) Description

Title :  FOUR-ALPHA-HELIX BUNDLE WITH DESIGNED ANESTHETIC BINDING POCKETS II: HALOTHANE EFFECTS ON STRUCTURE AND DYNAMICS
 
Authors :  T. Cui, V. Bondarenko, D. Ma, C. Canlas, N. R. Brandon, J. S. Johansson, P. Tang, Y. Xu
Date :  12 Jul 07  (Deposition) - 27 May 08  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
Keywords :  Four-Alpha-Helix Bundle, Anesthetic Binding, Alpha Helix, Homo Dimer, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Cui, V. Bondarenko, D. Ma, C. Canlas, N. R. Brandon, J. S. Johansson, Y. Xu, P. Tang
Four-Alpha-Helix Bundle With Designed Anesthetic Binding Pockets. Part Ii: Halothane Effects On Structure And Dynamics
Biophys. J. V. 94 4464 2008
PubMed-ID: 18310239  |  Reference-DOI: 10.1529/BIOPHYSJ.107.117853
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FOUR-ALPHA-HELIX BUNDLE
    Chains: A, B
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1HLT1Ligand/Ion2-BROMO-2-CHLORO-1,1,1-TRIFLUOROETHANE

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:14 , TRP A:15 , LEU A:18 , PHE B:12 , GLU B:14 , TRP B:15 , LYS B:16BINDING SITE FOR RESIDUE HLT A 101

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:62
                                                                                             
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                  2jst A  1 MKKLREEAAKLFEEWKKLAEEAAKLLEGGGGGGGGELMKLCEEAAKKAEELFKLAEERLKKL 62
                                    10        20        30        40        50        60  


Chain B from PDB  Type:PROTEIN  Length:62
                                                                                             
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                  2jst B  1 MKKLREEAAKLFEEWKKLAEEAAKLLEGGGGGGGGELMKLCEEAAKKAEELFKLAEERLKKL 62
                                    10        20        30        40        50        60
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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