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(-) Description

Title :  SOLUTION NMR STRUCTURE OF SO0334 FROM SHEWANELLA ONEIDENSIS. NORTHEAST STRUCTURAL GENOMICS TARGET SOR75
 
Authors :  Y. Tang, D. Wang, C. Nwosu, K. Cunningham, R. Xiao, J. Liu, M. C. Baran, G. T. B. Acton, B. Rost, G. T. Montelione, Northeast Structural Genomi Consortium (Nesg)
Date :  28 Jun 07  (Deposition) - 21 Aug 07  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Solution Nmr Structure, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tang, D. Wang, C. Nwosu, K. Cunningham, R. Xiao, J. Liu, M. C. Baran, G. Swapna, T. B. Acton, B. Rost, G. T. Montelione
Solution Structure Of So0334 From Shewanella Oneidensis.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector: SOR75_21.1
    Expression System Vector Type: PLASMID
    Gene: SO_0334
    Organism Scientific: SHEWANELLA ONEIDENSIS
    Organism Taxid: 211586
    Other Details: THE PROTEIN IS A MONOMER BY GEL FILTRATION CHROMATOGRAPHY AND STATIC LIGHT SCATTERING.
    Strain: MR-1

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JRO)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:74
 aligned with Q8EJX2_SHEON | Q8EJX2 from UniProtKB/TrEMBL  Length:70

    Alignment length:74
                                                                                                70    
                                    10        20        30        40        50        60        70    
          Q8EJX2_SHEON    1 MRVFPVYAPKLIVKHARIFLTGVIWVKDLGRLEFEKGRFLLPRKSLPKVKQAILELNELIEAQNHQTKTA----  -
               SCOP domains -------------------------------------------------------------------------- SCOP domains
               CATH domains 2jroA01 A:1-65 so0334 like domain                                --------- CATH domains
               Pfam domains DUF1107-2jroA01 A:1-64                                          ---------- Pfam domains
         Sec.struct. author .eee...hhhhhhhhhhhhh.eeeee...eeeeee..ee......hhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------- Transcript
                  2jro A  1 MRVFPVYAPKLIVKHARIFLTGVIWVKDLGRLEFEKGRFLLPRKSLPKVKQAILELNELIEAQNHQTKTALEHH 74
                                    10        20        30        40        50        60        70
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JRO)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF1107] (1)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (Q8EJX2_SHEON | Q8EJX2)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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