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(-) Description

Title :  STRUCTURE OF THE N-OXYGENASE AURF FROM STREPTOMYCES THIOLUTEUS
 
Authors :  G. E. Zocher, R. Winkler, C. Hertweck, G. E. Schulz
Date :  21 Dec 06  (Deposition) - 11 Sep 07  (Release) - 28 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.11
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Oxidation Of P-Benzoic Acid, Oxidoreductase, N-Oxygenase, Di- Manganese Mono-Oxygenase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. E. Zocher, R. Winkler, C. Hertweck, G. E. Schulz
Structure And Action Of The N-Oxygenase Aurf From Streptomyces Thioluteus.
J. Mol. Biol. V. 373 65 2007
PubMed-ID: 17765264  |  Reference-DOI: 10.1016/J.JMB.2007.06.014

(-) Compounds

Molecule 1 - N-OXIDASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMAL-C2X/AURF
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PMAL-C2X
    Organism Scientific: STREPTOMYCES THIOLUTEUS
    Organism Taxid: 66431
    Synonym: N-OXYGENASE AURF

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 11)

Asymmetric/Biological Unit (2, 11)
No.NameCountTypeFull Name
1EDO7Ligand/Ion1,2-ETHANEDIOL
2MN4Ligand/IonMANGANESE (II) ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:101 , GLU A:136 , HIS A:139 , HIS A:223 , GLU A:227 , MN A:1323 , HOH A:2267 , HOH A:2268BINDING SITE FOR RESIDUE MN A1322
02AC2SOFTWAREGLU A:136 , GLU A:196 , GLU A:227 , HIS A:230 , MN A:1322 , HOH A:2268BINDING SITE FOR RESIDUE MN A1323
03AC3SOFTWARESER A:25 , ALA A:26 , LYS A:44 , ILE A:47 , HOH A:2269 , HOH A:2270BINDING SITE FOR RESIDUE EDO A1328
04AC4SOFTWARETHR A:56 , ARG A:251 , ARG A:255BINDING SITE FOR RESIDUE EDO A1329
05AC5SOFTWARETYR A:54 , ASP A:60 , ARG A:149 , THR A:150 , LEU A:153 , ARG A:154 , HIS A:216BINDING SITE FOR RESIDUE EDO A1330
06AC6SOFTWAREARG A:96 , PRO A:163 , LEU A:165 , HOH A:2095 , HOH A:2271 , ALA B:14BINDING SITE FOR RESIDUE EDO A1331
07AC7SOFTWAREPRO A:118 , ARG A:244BINDING SITE FOR RESIDUE EDO A1332
08AC8SOFTWAREGLU B:101 , GLU B:136 , HIS B:139 , HIS B:223 , GLU B:227 , MN B:1321 , HOH B:2163BINDING SITE FOR RESIDUE MN B1320
09AC9SOFTWAREGLU B:136 , GLU B:196 , GLU B:227 , HIS B:230 , MN B:1320 , HOH B:2163BINDING SITE FOR RESIDUE MN B1321
10BC1SOFTWAREALA A:14 , PRO B:163 , LEU B:165 , HOH B:2150 , HOH B:2164 , HOH B:2165BINDING SITE FOR RESIDUE EDO B1322
11BC2SOFTWAREMET A:144 , TRP B:12 , ARG B:126 , HOH B:2010BINDING SITE FOR RESIDUE EDO B1323

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JCD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JCD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JCD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JCD)

(-) Exons   (0, 0)

(no "Exon" information available for 2JCD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:315
 aligned with Q70KH9_9ACTN | Q70KH9 from UniProtKB/TrEMBL  Length:336

    Alignment length:315
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316     
         Q70KH9_9ACTN     7 HLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWADYDTLVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLSALLLELNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQLGLDDAVD 321
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhh.................hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhh..........hhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jcd A   7 HLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWADYDTLVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLSALLLELNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQLGLDDAVD 321
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316     


Chain B from PDB  Type:PROTEIN  Length:313
 aligned with Q70KH9_9ACTN | Q70KH9 from UniProtKB/TrEMBL  Length:336

    Alignment length:313
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316   
         Q70KH9_9ACTN     7 HLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWADYDTLVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLSALLLELNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQLGLDDA 319
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhh.................hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhh..........hhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jcd B   7 HLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWADYDTLVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLSALLLELNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQLGLDDA 319
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JCD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2JCD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2JCD)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (Q70KH9_9ACTN | Q70KH9)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

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UniProtKB/TrEMBL
        Q70KH9_9ACTN | Q70KH9: 3chh 3chi 3cht 3chu

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