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(-) Description

Title :  REFINED CRYSTAL STRUCTURE OF A RECOMBINANT IMMUNOGLOBULIN DOMAIN AND A COMPLEMENTARITY-DETERMINING REGION 1-GRAFTED MUTANT
 
Authors :  B. Steipe, R. Huber
Date :  30 Mar 92  (Deposition) - 15 Jul 93  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.97
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (2x)
Keywords :  Immunoglobulin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Steipe, A. Pluckthun, R. Huber
Refined Crystal Structure Of A Recombinant Immunoglobulin Domain And A Complementarity-Determining Region 1-Grafted Mutant.
J. Mol. Biol. V. 225 739 1992
PubMed-ID: 1602480  |  Reference-DOI: 10.1016/0022-2836(92)90398-4

(-) Compounds

Molecule 1 - IGA-KAPPA MCPC603 FV (LIGHT CHAIN)
    Chains: A
    Engineered: YES
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2SO41Ligand/IonSULFATE ION
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2SO42Ligand/IonSULFATE ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2SO42Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:54 , HOH A:416BINDING SITE FOR RESIDUE SO4 A 318
2AC2SOFTWARELYS A:31E , PHE A:32 , LEU A:33 , GLY A:50 , ASP A:91 , TYR A:94BINDING SITE FOR RESIDUE ACT A 319

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:23 -A:88

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser A:7 -Pro A:8
2Tyr A:94 -Pro A:95

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:113
                                                                                                                                                 
               SCOP domains d2imna_ A: Immunoglobulin light chain kappa variable domain, VL-kappa                                             SCOP domains
               CATH domains 2imnA00 A:1-108 Immunoglobulins                                                                                   CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee....ee......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 2imn A   1 DIVMTQSPSSLSVSAGERVTMSCKSSQSLLYKDGKNFLAWYQQKPGQPPKLLIYGASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDHSYPLTFGAGTKLELKR 108
                                    10        20        30 |||||  35        45        55        65        75        85        95       105   
                                                         31A||||                                                                             
                                                          31C|||                                                                             
                                                           31D||                                                                             
                                                            31E|                                                                             
                                                             31F
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2IMN)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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