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(-) Description

Title :  SOLUTION STRUCTURE OF ARABIDOPSIS THALIANA PROTEIN AT1G70830, A MEMBER OF THE MAJOR LATEX PROTEIN FAMILY
 
Authors :  B. F. Volkman, N. B. De La Cruz, B. L. Lytle, F. C. Peterson, Center For Eukaryotic Structural Genomics (Cesg)
Date :  06 Sep 06  (Deposition) - 19 Sep 06  (Release) - 29 Sep 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  At1G70830, Bet V1-Like, Structural Genomics, Protein Structure Initiative, Psi, Center For Eukaryotic Structural Genomics, Cesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. L. Lytle, J. Song, N. B. De La Cruz, F. C. Peterson, K. A. Johnson, C. A. Bingman, G. N. Phillips, B. F. Volkman
Structures Of Two Arabidopsis Thaliana Major Latex Proteins Represent Novel Helix-Grip Folds.
Proteins V. 76 237 2009
PubMed-ID: 19326460  |  Reference-DOI: 10.1002/PROT.22396
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MAJOR LATEX PROTEIN-LIKE PROTEIN 28 OR MLP-LIKE PROTEIN 28
    Chains: A
    Engineered: YES
    Expression System: CELL-FREE SYNTHESIS
    Expression System Plasmid: PEU-HIS
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 17-157
    Gene: AT1G70830, MLP28
    Organism Common: THALE CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Other Details: WHEAT GERM CELL-FREE, IN VITRO EXPRESSION

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:157
 aligned with MLP28_ARATH | Q9SSK9 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:157
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       
          MLP28_ARATH    17 TEASSLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLLAEE 173
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2i9yA00 A:17-173  [code=3.30.530.20, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeee..hhhhhhhhhh...............................eeeeee..eeeeeeeeeeeee....eeeeee...hhhh.eeeeeeeeeeeeeee..eeeeeeeeeeee.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2i9y A  17 TEASSLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLLAEE 173
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166
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 Classification and Annotation

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(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (MLP28_ARATH | Q9SSK9)
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0009607    response to biotic stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.

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