Chain A from PDB Type:PROTEIN Length:298
aligned with Q8A1H2_BACTN | Q8A1H2 from UniProtKB/TrEMBL Length:305
Alignment length:298
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
Q8A1H2_BACTN 1 MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADTSIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDH 298
SCOP domains d2hqya2 A:1-134 Hypothetical protein BT3689 d2hqya1 A:135-298 Hypothetical protein BT3689 SCOP domains
CATH domains 2hqyA01 A:1-121,A:290-298 [code=3.40.630.30, no name defined] 2hqyA02 A:122-289 [code=3.40.630.30, no name defined] 2hqyA01 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....ee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.eeeee..eeeeeeee..eeeee..ee..hhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhh...eeeee.hhhheeeeehhhhhhh.hhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.....eee......hhhhhhhhhhh...eee..eeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2hqy A 1 MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADTSIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDH 298
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
Chain B from PDB Type:PROTEIN Length:296
aligned with Q8A1H2_BACTN | Q8A1H2 from UniProtKB/TrEMBL Length:305
Alignment length:296
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
Q8A1H2_BACTN 1 MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADTSIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLK 296
SCOP domains d2hqyb2 B:1-134 Hypothetical protein BT3689 d2hqyb1 B:135-296 Hypothetical protein BT3689 SCOP domains
CATH domains 2hqyB01 B:1-121,B:290-296 [code=3.40.630.30, no name defined] 2hqyB02 B:122-289 [code=3.40.630.30, no name defined] 2hqyB01 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....ee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.eeeee..eeeeeeee..eeeee..ee..hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhhhh...eeeee.hhhheeeeehhhhhhh.hhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh.....eee......hhhhhhhhhhh...eee..eeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2hqy B 1 MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADTSIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLK 296
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |