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(-) Description

Title :  STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION FROM BACTEROIDES THETAIOTAOMICRON.
 
Authors :  M. E. Cuff, L. Bigelow, J. Abdullah, F. Collart, A. Joachimiak, Midwest For Structural Genomics (Mcsg)
Date :  20 Dec 05  (Deposition) - 07 Mar 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym./Biol. Unit :  A
Keywords :  Bacteroides Thetaiotaomicron, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Cuff, L. Bigelow, J. Abdullah, F. Collart, A. Joachimiak
Structure Of A Hypothetical Protein From Bacteroides Thetaiotaomicron.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN BT1257
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 226186
    Strain: VPI-5482

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric/Biological Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2FG1)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FG1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2FG1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FG1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FG1)

(-) Exons   (0, 0)

(no "Exon" information available for 2FG1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:157
 aligned with Q8A8B0_BACTN | Q8A8B0 from UniProtKB/TrEMBL  Length:155

    Alignment length:157
                              1                                                                                                                                                          
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       
         Q8A8B0_BACTN     - --MEILYIKGDATAPIGSGVKVITHICNDIGGWGKGFVLALSKKWKMPEEAYRQWYKSQEEFTLGAVQFVNVENKLYVANMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKASVHMPRIGCGLAGGKWELMEQIIKEELITKEIAVTVYDL 155
               SCOP domains d2fg1a_ A: automated matches                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee...........eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee..eeeeeeeee.............hhhhhhhhhhhhhhhhhhhh.eeee..........hhhhhhhhhhhhhhhhh..eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fg1 A  -1 NAmEILYIKGDATAPIGSGVKVITHICNDIGGWGKGFVLALSKKWKmPEEAYRQWYKSQEEFTLGAVQFVNVENKLYVANmIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKASVHmPRIGCGLAGGKWELmEQIIKEELITKEIAVTVYDL 155
                              |      8        18        28        38      | 48        58        68        78|       88        98       108       118 |     128      |138       148       
                              |                                          45-MSE                            79-MSE                                  120-MSE        135-MSE                
                              1-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2FG1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FG1)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q8A8B0_BACTN | Q8A8B0)
molecular function
    GO:0004386    helicase activity    Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

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 Related Entries

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UniProtKB/TrEMBL
        Q8A8B0_BACTN | Q8A8B0: 2afc

(-) Related Entries Specified in the PDB File

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