Chain A from PDB Type:PROTEIN Length:143
aligned with O58553_PYRHO | O58553 from UniProtKB/TrEMBL Length:170
Alignment length:157
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
O58553_PYRHO 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIKEVDEN 160
SCOP domains d2duma_ A: automated matches SCOP domains
CATH domains 2dumA00 A:4-160 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee...hhhhhhhhhhhhhhh.....eeeeeeeee.hhhhh..------------....hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhhh...eeeee....--......hhhhhhhhhhh...eeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2dum A 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELM------------ELKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK--LSHEFLGSTVMRVLRKTKKPVLIIKEVDEN 160
13 23 33 43 | - -| 73 83 93 103 113 123 | 133 143 153
51 64 128 |
131
Chain B from PDB Type:PROTEIN Length:139
aligned with O58553_PYRHO | O58553 from UniProtKB/TrEMBL Length:170
Alignment length:156
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
O58553_PYRHO 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIKEVDE 159
SCOP domains d2dumb_ B: automated matches SCOP domains
CATH domains 2dumB00 B:4-159 Tyrosyl-Transfer RNA Synthetase , s ubunit E, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeee...hhhhhhhhhhhhhhh...eeeeeeeeeee.hhhhhhhhh.-----------.hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhh...eeeee..------....hhhhhhhhhhh...eeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dum B 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGY-----------KDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSR------HEFLGSTVMRVLRKTKKPVLIIKEVDE 159
13 23 33 43 53| - | 73 83 93 103 113 123 | 133 143 153
54 66 126 133
Chain C from PDB Type:PROTEIN Length:146
aligned with O58553_PYRHO | O58553 from UniProtKB/TrEMBL Length:170
Alignment length:158
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
O58553_PYRHO 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIKEVDENE 161
SCOP domains d2dumc_ C: automated matches SCOP domains
CATH domains 2dumC00 C:4-161 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee...hhhhhhhhhhhhhhh.....eeeeeeeee.hhh.....------------.hhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhhhh..eeeee............hhhhhhhhhhh...eeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2dum C 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMD------------LKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIKEVDENE 161
13 23 33 43 |- - | 73 83 93 103 113 123 133 143 153
52 65
Chain D from PDB Type:PROTEIN Length:141
aligned with O58553_PYRHO | O58553 from UniProtKB/TrEMBL Length:170
Alignment length:156
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
O58553_PYRHO 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIKEVDE 159
SCOP domains d2dumd_ D: automated matches SCOP domains
CATH domains 2dumD00 D:4-159 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeee...hhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhh..-----------...hhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhh...eeeee....----....hhhhhhhhhhh...eeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dum D 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDG-----------LKDIKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK----HEFLGSTVMRVLRKTKKPVLIIKEVDE 159
13 23 33 43 53 - | 73 83 93 103 113 123 | 133 143 153
53 65 128 133
Legend: |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |