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(-) Description

Title :  CRYSTAL STRUCTURE OF TTHA0137 FROM THERMUS THERMOPHILUS HB8
 
Authors :  H. Wang, K. Murayama, T. Terada, M. Shirouzu, S. Kuramitsu, S. Yokoyama Structural Genomics/Proteomics Initiative (Rsgi)
Date :  16 Jun 05  (Deposition) - 16 Dec 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (3x)
Keywords :  Structural Genomics, Unknown Function, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Wang, K. Murayama, T. Terada, M. Shirouzu, S. Kuramitsu, S. Yokoyam
Crystal Structure Of Ttha0137 From Thermus Thermophilus Hb8
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TRANSLATION INITIATION INHIBITOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11A
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 9)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2CW4)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2CW4)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Pro A:96 -Pro A:97

 Sequence-Structure Mapping

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(-) Sequences/Alignments

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   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:124
 aligned with Q5SM06_THET8 | Q5SM06 from UniProtKB/TrEMBL  Length:124

    Alignment length:124
                                    10        20        30        40        50        60        70        80        90       100       110       120    
         Q5SM06_THET8     1 MEAVKTDRAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVYARYFTPPYPARATVAVKALPRGVRVEVACVALAE 124
               SCOP domains d2cw4a_ A: automated matches                                                                                                 SCOP domains
               CATH domains -2cw4A00 A:2-124  [code=3.30.1330.40, no name defined]                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..............eeee..eeeeeee............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 2cw4 A   1 mEAVKTDRAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVmENLKAVLEAAGSGLSRVVQTTCFLADmEDFPGFNEVYARYFTPPYPARATVAVKALPRGVRVEVACVALAE 124
                            |       10        20        30        40        50  |     60        70        80        90       100       110       120    
                            |                                                  53-MSE                     80-MSE                                        
                            1-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2CW4)

(-) Gene Ontology  (0, 0)

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