Chain A from PDB Type:PROTEIN Length:204
aligned with Q8CK55_STRCO | Q8CK55 from UniProtKB/TrEMBL Length:244
Alignment length:204
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Q8CK55_STRCO 41 FVVSEAQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 244
SCOP domains d2cjla_ A: automated matches SCOP domains
CATH domains ----------------------------------------------------------------2cjlA02 A:76-136 Endochitinase, domain 2 ------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhh........................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhh..hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2cjl A 12 FVVSEAQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 215
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Chain B from PDB Type:PROTEIN Length:204
aligned with Q8CK55_STRCO | Q8CK55 from UniProtKB/TrEMBL Length:244
Alignment length:204
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Q8CK55_STRCO 41 FVVSEAQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 244
SCOP domains d2cjlb_ B: automated matches SCOP domains
CATH domains ----------------------------------------------------------------2cjlB02 B:76-136 Endochitinase, domain 2 ------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhh........................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhh..hhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2cjl B 12 FVVSEAQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 215
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |