Chain A from PDB Type:PROTEIN Length:244
aligned with LPLAN_THEAC | Q9HKT1 from UniProtKB/Swiss-Prot Length:262
Alignment length:258
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250
LPLAN_THEAC 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGLLR 258
SCOP domains d2c7ia_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeeee......hhhhhhhhhhhhhhhh......eeeee....eeee..........hhhhhhhh..eeee.......eee...eeeeeeeeee...hhhhhhhhhhhhhhhhhhhh....ee...............eee..eeeeeeeeeee.eeeeeeeeee...hhhhhhhhh.--------------.....hhhhh...hhhhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh..hhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------------------BPL_LPL_CATALYTIC PDB: A:30-226 UniProt: 30-226 -------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2c7i A 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGLLR 258
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | - - | 200 210 220 230 240 250
178 193
Chain B from PDB Type:PROTEIN Length:240
aligned with LPLAN_THEAC | Q9HKT1 from UniProtKB/Swiss-Prot Length:262
Alignment length:256
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250
LPLAN_THEAC 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL 256
SCOP domains d2c7ib_ B: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhhh......eeeee....eeee....hhhhhhhhhhhhhhh.eeee.......eee...eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh...ee...............eee..eeeeeeeeeee..eeeeeeeee...hhhhhhhhh----------------....hhhhh...hhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhhhh..hhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------BPL_LPL_CATALYTIC PDB: B:30-226 UniProt: 30-226 ------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c7i B 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL----------------ERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL 256
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | - - | 200 210 220 230 240 250
177 194
Chain C from PDB Type:PROTEIN Length:240
aligned with LPLAN_THEAC | Q9HKT1 from UniProtKB/Swiss-Prot Length:262
Alignment length:256
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250
LPLAN_THEAC 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL 256
SCOP domains d2c7ic_ C: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee......hhhhhhhhhhhhhhhh......eeeee....eeee....hhhhhhhhhhhh-...eeee.......eee...eeeeeeeee....hhhhhhhhhhhhhhhhhhhh....ee...............eee..eeeeeeeeeee..eeeeeeeee............---------------.....hhhhhh..hhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh..hhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------BPL_LPL_CATALYTIC PDB: C:30-226 UniProt: 30-226 ------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c7i C 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMK-NGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL---------------RERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL 256
10 20 30 40 50 60 | | 70 80 90 100 110 120 130 140 150 160 170 | - - | 200 210 220 230 240 250
63 | 177 193
65
Chain D from PDB Type:PROTEIN Length:240
aligned with LPLAN_THEAC | Q9HKT1 from UniProtKB/Swiss-Prot Length:262
Alignment length:257
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250
LPLAN_THEAC 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGLL 257
SCOP domains d2c7id_ D: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhh.......eeeee...eeeee....hhhhhh..-.......eeee.......eeee..eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh...ee...............eee..eeeeeeeeee...eeeeeeeee...hhhhhhhhh----------------....hhhhh...hhhhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh..hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------BPL_LPL_CATALYTIC PDB: D:30-226 UniProt: 30-226 ------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c7i D 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDL-YMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL----------------ERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGLL 257
10 20 30 40 50 |-| 70 80 90 100 110 120 130 140 150 160 170 | - - | 200 210 220 230 240 250
59 | 177 194
61
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |