2C5Q - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF YEAST YER010CP

Authors :   N. Leulliot, S. Quevillon-Cheruel, M. Graille, M. Schiltz, K. Blondeau, J. Janin, H. Van Tilbeurgh

Date :   31 Oct 05 (Deposition) - 14 Nov 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: D,E,F  (1x)

Keywords :   Structural Genomics, Unknown Function, Structural Genomics, Unknown Function, Pseudo-Knot, Rraa (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. Leulliot, S. Quevillon-Cheruel, M. Graille, M. Schiltz, K. Blondeau, J. Janin, H. Van Tilbeurgh
Crystal Structure Of Yeast Yer010Cp, A Knotable Member Of The Rraa Protein Family.
Protein Sci. V. 14 2751 2005
PubMed-ID: 16195557 | Reference-DOI: 10.1110/PS.051684005

Molecule 1 - RRAA-LIKE PROTEIN YER010C
	Chains	:	A, B, C, D, E, F
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	GOLD(DE3)
	Expression System Taxid	:	562
	Expression System Vector	:	PET9
	Organism Common	:	BAKER'S YEAST
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932
	Synonym	:	HYPOTHETICAL 25.6 KDA PROTEIN IN NTF2-SRP1 INTERGENIC REGION

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:				D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 19)

No.	Name	Count	Type	Full Name
1	CME	6	Mod. Amino Acid	S,S-(2-HYDROXYETHYL)THIOCYSTEINE
2	EDO	13	Ligand/Ion	1,2-ETHANEDIOL

Biological Unit 1 (2, 7)

No.	Name	Count	Type	Full Name
1	CME	3	Mod. Amino Acid	S,S-(2-HYDROXYETHYL)THIOCYSTEINE
2	EDO	4	Ligand/Ion	1,2-ETHANEDIOL

Biological Unit 2 (2, 12)

No.	Name	Count	Type	Full Name
1	CME	3	Mod. Amino Acid	S,S-(2-HYDROXYETHYL)THIOCYSTEINE
2	EDO	9	Ligand/Ion	1,2-ETHANEDIOL

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ILE A:25 , THR A:27 , GLN A:167 , ARG A:184 , HOH A:2297 , HOH A:2298	BINDING SITE FOR RESIDUE EDO A1234
02	AC2	SOFTWARE	VAL A:139 , LEU B:34 , THR B:35 , ALA B:36 , ASN B:179 , HOH B:2045	BINDING SITE FOR RESIDUE EDO B1233
03	AC3	SOFTWARE	ASP B:123 , VAL B:124 , ASP B:125 , GLU B:126 , HOH B:2145 , ASN C:180 , HOH C:2022	BINDING SITE FOR RESIDUE EDO B1234
04	AC4	SOFTWARE	GLU C:211 , HOH C:2291 , VAL E:64 , ASN E:65 , LYS F:220 , EDO F:1235	BINDING SITE FOR RESIDUE EDO C1234
05	AC5	SOFTWARE	TYR D:99 , GLY D:100 , MET D:103 , ARG D:122 , PRO D:144	BINDING SITE FOR RESIDUE EDO D1234
06	AC6	SOFTWARE	ILE D:25 , THR D:27 , GLN D:167 , ARG D:184 , HOH D:2304 , HOH D:2305	BINDING SITE FOR RESIDUE EDO D1235
07	AC7	SOFTWARE	ASN D:65 , ILE D:67 , HOH D:2306 , HOH D:2307 , HOH D:2308 , LYS E:220 , GLN E:223	BINDING SITE FOR RESIDUE EDO D1236
08	AC8	SOFTWARE	LEU D:34 , THR D:35 , ALA D:36 , ASP D:178 , ASN D:179 , GLY D:181 , HOH D:2076 , VAL F:139	BINDING SITE FOR RESIDUE EDO D1237
09	AC9	SOFTWARE	ASN D:180 , ASP F:123 , VAL F:124 , ASP F:125 , GLU F:126 , HOH F:2158 , HOH F:2270	BINDING SITE FOR RESIDUE EDO F1232
10	BC1	SOFTWARE	VAL E:139 , LEU F:34 , THR F:35 , ALA F:36 , ASP F:178 , ASN F:179 , GLY F:181 , HOH F:2050 , HOH F:2218	BINDING SITE FOR RESIDUE EDO F1233
11	BC2	SOFTWARE	HOH A:2274 , ARG F:61 , VAL F:151 , HOH F:2271 , HOH F:2272	BINDING SITE FOR RESIDUE EDO F1234
12	BC3	SOFTWARE	EDO C:1234 , HOH C:2291 , LYS F:220 , GLN F:223 , ASN F:224 , HOH F:2258 , HOH F:2273	BINDING SITE FOR RESIDUE EDO F1235
13	BC4	SOFTWARE	MET F:98 , TYR F:99 , GLY F:100 , MET F:103 , ARG F:122 , PRO F:144 , HOH F:2274	BINDING SITE FOR RESIDUE EDO F1236

(no "SS Bond" information available for 2C5Q)

Asymmetric Unit

No.	Residues
1	His A:89	-	Pro A:90
2	His B:89	-	Pro B:90
3	His C:89	-	Pro C:90
4	His D:89	-	Pro D:90
5	His E:89	-	Pro E:90
6	His F:89	-	Pro F:90

(no "SAP(SNP)/Variant" information available for 2C5Q)

(no "PROSITE Motif" information available for 2C5Q)

Asymmetric Unit (1, 6)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	YER010C	1	YER010C.1	V:173337-172633	705	RRAAH_YEAST	1-234	234	6	A:2-234 B:2-233 C:2-234 D:2-234 E:2-234 F:2-232	233 232 233 233 233 231

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:233
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:233
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh..hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: A:2-234 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                        Transcript 1
                 2c5q A   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
                                                                                                                                                                                                  170-CME

Chain B from PDB  Type:PROTEIN  Length:232
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:232
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231  
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKY 233
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh..hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: B:2-233 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                       Transcript 1
                 2c5q B   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKY 233
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231  
                                                                                                                                                                                                  170-CME

Chain C from PDB  Type:PROTEIN  Length:233
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:233
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh..hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: C:2-234 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                        Transcript 1
                 2c5q C   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
                                                                                                                                                                                                  170-CME

Chain D from PDB  Type:PROTEIN  Length:233
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:233
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh..hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: D:2-234 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                        Transcript 1
                 2c5q D   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI 234
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   
                                                                                                                                                                                                  170-CME

Chain E from PDB  Type:PROTEIN  Length:234
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:234
                                                                                                                                                                                                                                                                  234 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231  | 
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYI-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhh..hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 1 Exon 1.1  PDB: E:2-234 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                       - Transcript 1
                 2c5q E   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKKYIH 235
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231    
                                                                                                                                                                                                  170-CME

Chain F from PDB  Type:PROTEIN  Length:231
 aligned with RRAAH_YEAST | P40011 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:231
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231 
          RRAAH_YEAST     2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTICPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKK 232
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh.hhhhhhhhhhhhhh.....ee...eeee......eeeeeeeeeeee.........hhhhh...eeeeeee.hhh...............hhhhhhhhhhh...eeeeeeee.hhhhhhhhh..eeeeee........eeeeee...eeee.....eeee....eeeee..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: F:2-232 UniProt: 1-234 [INCOMPLETE]                                                                                                                                                                                      Transcript 1
                 2c5q F   2 SDLQKLQRFSTCDISDGLLNVYNIPTGGYFPNLTAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKITQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDEHRTLNHPVFAYGVGSCAPKAVVKAVGTNVQLKILTSDGVTQTIcPGDYIAGDNNGIVRIPVQETDISKLVTYIEKSIEVDLLVSEDIKNGIPAKQAQNDRRSVLKK 232
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231 
                                                                                                                                                                                                  170-CME

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2C5Q)

(no "CATH Domain" information available for 2C5Q)

(no "Pfam Domain" information available for 2C5Q)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (RRAAH_YEAST | P40011)

molecular function
	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	Catalysis of the reaction: 4-hydroxy-4-methyl-2-oxoglutarate = 2 pyruvate.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008948	oxaloacetate decarboxylase activity	Catalysis of the reaction: oxaloacetate = pyruvate + CO2.
biological process
	GO:0019619	3,4-dihydroxybenzoate catabolic process	The chemical reactions and pathways resulting in the breakdown of 3,4-dihydroxybenzoate.
cellular component
	GO:0005575	cellular_component	The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

Asymmetric Unit
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	Cis Peptide Bonds
		His A:89 - Pro A:90	[ RasMol ]
		His B:89 - Pro B:90	[ RasMol ]
		His C:89 - Pro C:90	[ RasMol ]
		His D:89 - Pro D:90	[ RasMol ]
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		His F:89 - Pro F:90	[ RasMol ]

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	2c5q
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 19)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (1, 6)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File