2BJE - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   ACYLPHOSPHATASE FROM SULFOLOBUS SOLFATARICUS. MONCLINIC P21 SPACE GROUP

Authors :   C. Rosano, S. Zuccotti

Date :   02 Feb 05 (Deposition) - 23 Nov 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.90

Chains :   Asym. Unit : A,C,E,G
Biol. Unit 1: A  (1x)
Biol. Unit 2: C  (1x)
Biol. Unit 3: E  (1x)
Biol. Unit 4: G  (1x)

Keywords :   Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Corazza, C. Rosano, K. Pagano, V. Alverdi, G. Esposito, C. Capanni, F. Bemporad, G. Plakoutsi, M. Stefani, F. Chiti, S. Zuccotti, M. Bolognesi, P. Viglino
Structure, Conformational Stability, And Enzymatic Properties Of Acylphosphatase From The Hyperthermophile Sulfolobus Solfataricus.
Proteins: Struct. , Funct. , V. 62 64 2006 Bioinf.
PubMed-ID: 16287076 | Reference-DOI: 10.1002/PROT.20703
(for further references see the PDB file header)

Molecule 1 - ACYLPHOSPHATASE
	Chains	:	A, C, E, G
	EC Number	:	3.6.1.7
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	SULFOLOBUS SOLFATARICUS
	Organism Taxid	:	2287

		1	2	3	4
Asymmetric Unit	:	A	C	E	G
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		C
Biological Unit 3 (1x)	:			E
Biological Unit 4 (1x)	:				G

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 7)

No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	SO4	6	Ligand/Ion	SULFATE ION

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 4 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	VAL A:20 , GLY A:21 , PHE A:22 , ARG A:23 , LYS A:24 , HOH A:2004 , HOH A:2006	BINDING SITE FOR RESIDUE SO4 A1095
2	AC2	SOFTWARE	ARG A:32 , ARG A:64	BINDING SITE FOR RESIDUE CL A1096
3	AC3	SOFTWARE	GLN A:27 , GLU A:92 , THR A:93 , ARG G:64	BINDING SITE FOR RESIDUE SO4 A1097
4	AC4	SOFTWARE	LYS A:76 , VAL A:77 , HOH A:2041 , HOH A:2042	BINDING SITE FOR RESIDUE SO4 A1098
5	AC5	SOFTWARE	VAL C:20 , GLY C:21 , PHE C:22 , ARG C:23 , LYS C:24 , HOH C:2006 , HOH C:2053	BINDING SITE FOR RESIDUE SO4 C1095
6	AC6	SOFTWARE	GLY E:19 , VAL E:20 , GLY E:21 , PHE E:22 , ARG E:23 , LYS E:24 , HOH E:2041 , HOH E:2042 , HOH E:2043	BINDING SITE FOR RESIDUE SO4 E1095
7	AC7	SOFTWARE	VAL G:20 , GLY G:21 , PHE G:22 , ARG G:23 , LYS G:24 , HOH G:2005 , HOH G:2045	BINDING SITE FOR RESIDUE SO4 G1095

(no "SS Bond" information available for 2BJE)

(no "Cis Peptide Bond" information available for 2BJE)

(no "SAP(SNP)/Variant" information available for 2BJE)

Asymmetric Unit (3, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACYLPHOSPHATASE_3	PS51160	Acylphosphatase-like domain profile.	ACYP_SULSO	15-101	4	A:8-94 C:8-94 E:8-94 G:8-94
2	ACYLPHOSPHATASE_1	PS00150	Acylphosphatase signature 1.	ACYP_SULSO	20-30	4	A:13-23 C:13-23 E:13-23 G:13-23
3	ACYLPHOSPHATASE_2	PS00151	Acylphosphatase signature 2.	ACYP_SULSO	44-60	4	A:37-53 C:37-53 E:37-53 G:37-53

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACYLPHOSPHATASE_3	PS51160	Acylphosphatase-like domain profile.	ACYP_SULSO	15-101	1	A:8-94 - - -
2	ACYLPHOSPHATASE_1	PS00150	Acylphosphatase signature 1.	ACYP_SULSO	20-30	1	A:13-23 - - -
3	ACYLPHOSPHATASE_2	PS00151	Acylphosphatase signature 2.	ACYP_SULSO	44-60	1	A:37-53 - - -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACYLPHOSPHATASE_3	PS51160	Acylphosphatase-like domain profile.	ACYP_SULSO	15-101	1	- C:8-94 - -
2	ACYLPHOSPHATASE_1	PS00150	Acylphosphatase signature 1.	ACYP_SULSO	20-30	1	- C:13-23 - -
3	ACYLPHOSPHATASE_2	PS00151	Acylphosphatase signature 2.	ACYP_SULSO	44-60	1	- C:37-53 - -

Biological Unit 3 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACYLPHOSPHATASE_3	PS51160	Acylphosphatase-like domain profile.	ACYP_SULSO	15-101	1	- - E:8-94 -
2	ACYLPHOSPHATASE_1	PS00150	Acylphosphatase signature 1.	ACYP_SULSO	20-30	1	- - E:13-23 -
3	ACYLPHOSPHATASE_2	PS00151	Acylphosphatase signature 2.	ACYP_SULSO	44-60	1	- - E:37-53 -

Biological Unit 4 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACYLPHOSPHATASE_3	PS51160	Acylphosphatase-like domain profile.	ACYP_SULSO	15-101	1	- - - G:8-94
2	ACYLPHOSPHATASE_1	PS00150	Acylphosphatase signature 1.	ACYP_SULSO	20-30	1	- - - G:13-23
3	ACYLPHOSPHATASE_2	PS00151	Acylphosphatase signature 2.	ACYP_SULSO	44-60	1	- - - G:37-53

(no "Exon" information available for 2BJE)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:90
 aligned with ACYP_SULSO | Q97ZL0 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:90
                                    21        31        41        51        61        71        81        91       101
           ACYP_SULSO    12 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY 101
               SCOP domains d2bjea_ A: automated matches                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeee....hhhhhhhhhhhhh..eeeeee.....eeeeeeeehhhhhhhhhhhhhh....eeeeeeeeeee.......eeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---ACYLPHOSPHATASE_3  PDB: A:8-94 UniProt: 15-101                                          PROSITE (1)
                PROSITE (2) --------ACYLPHOSPHA-------------ACYLPHOSPHATASE_2----------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 2bje A   5 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY  94
                                    14        24        34        44        54        64        74        84        94

Chain C from PDB  Type:PROTEIN  Length:90
 aligned with ACYP_SULSO | Q97ZL0 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:90
                                    21        31        41        51        61        71        81        91       101
           ACYP_SULSO    12 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY 101
               SCOP domains d2bjec_ C: automated matches                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeee....hhhhhhhhhhhhh..eeeeee.....eeeeeeeehhhhhhhhhhhhhh....eeeeeeeeee........eeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---ACYLPHOSPHATASE_3  PDB: C:8-94 UniProt: 15-101                                          PROSITE (1)
                PROSITE (2) --------ACYLPHOSPHA-------------ACYLPHOSPHATASE_2----------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 2bje C   5 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY  94
                                    14        24        34        44        54        64        74        84        94

Chain E from PDB  Type:PROTEIN  Length:90
 aligned with ACYP_SULSO | Q97ZL0 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:90
                                    21        31        41        51        61        71        81        91       101
           ACYP_SULSO    12 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY 101
               SCOP domains d2bjee_ E: automated matches                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeee....hhhhhhhhhhhhh..eeeeee.....eeeeeeeehhhhhhhhhhhhhh....eeeeeeeeee........eeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---ACYLPHOSPHATASE_3  PDB: E:8-94 UniProt: 15-101                                          PROSITE (1)
                PROSITE (2) --------ACYLPHOSPHA-------------ACYLPHOSPHATASE_2----------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 2bje E   5 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY  94
                                    14        24        34        44        54        64        74        84        94

Chain G from PDB  Type:PROTEIN  Length:90
 aligned with ACYP_SULSO | Q97ZL0 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:90
                                    21        31        41        51        61        71        81        91       101
           ACYP_SULSO    12 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY 101
               SCOP domains d2bjeg_ G: automated matches                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeee....hhhhhhhhhhhhh..eeeeee.....eeeeeeeehhhhhhhhhhhhhh....eeeeeeeeee........eeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---ACYLPHOSPHATASE_3  PDB: G:8-94 UniProt: 15-101                                          PROSITE (1)
                PROSITE (2) --------ACYLPHOSPHA-------------ACYLPHOSPHATASE_2----------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 2bje G   5 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY  94
                                    14        24        34        44        54        64        74        84        94

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Ferredoxin-like (1795)

Superfamily: Acylphosphatase/BLUF domain-like (38)

Family: automated matches (15)

Protein domain: automated matches (15)

Sulfolobus solfataricus [TaxId: 2287] (5)

1a	d2bjea_	A:
1b	d2bjec_	C:
1c	d2bjee_	E:
1d	d2bjeg_	G:

(no "CATH Domain" information available for 2BJE)

(no "Pfam Domain" information available for 2BJE)

Asymmetric Unit(hide GO term definitions)

Chain A,C,E,G (ACYP_SULSO | Q97ZL0)

molecular function
	GO:0003998		acylphosphatase activity		Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate.
	GO:0016787		hydrolase activity		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

Asymmetric Unit
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(no "Cis Peptide Bonds" information available for 2bje)

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	2bje
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	ACYP_SULSO \| Q97ZL0	:	1y9o 2bjd 4oix 4oj1 4oj3 4ojg 4ojh

2bjd	SULFOLOBUS SOLFATARICUS ACYLPHOSPHATASE. TRICLINIC SPACE GROUP

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 7)

Sites (7, 7)

SS Bonds (0, 0)

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