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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PUTATIVE GLUCONATE KINASE FROM BACILLUS HALODURANS, NORTHEAST STRUCTURAL GENOMICS TARGET BHR61
 
Authors :  F. Forouhar, M. Abashidze, S. Jayaraman, H. Janjua, B. Cooper, R. Xiao, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structur Genomics Consortium (Nesg)
Date :  20 Oct 05  (Deposition) - 01 Nov 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Alpha-Beta Protein, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, M. Abashidze, S. Jayaraman, H. Janjua, B. Cooper, R. Xiao T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Putative Gluconate Kinase From Bacillus Halodurans, Northeast Structural Genomics Target Bhr61
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BH3686
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: XL-10
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BH3686
    Organism Scientific: BACILLUS HALODURANS
    Organism Taxid: 272558
    Strain: C-125

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
2SO41Ligand/IonSULFATE ION
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
2SO42Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:11 , GLY A:12 , VAL A:13 , GLY A:14 , LYS A:15 , SER A:16 , HOH A:226BINDING SITE FOR RESIDUE SO4 A 190

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2BDT)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:172
 aligned with Q9K6P2_BACHD | Q9K6P2 from UniProtKB/TrEMBL  Length:176

    Alignment length:176
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170      
         Q9K6P2_BACHD     1 MKKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRKKDEQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLKTNPRFIFC 176
               SCOP domains d2bdta1 A:1-176 Hypothetical protein BH3686                                                                                                                                      SCOP domains
               CATH domains -2bdtA00 A:2-176 P-loop containing nucleotide triphosphate hydrolases                                                                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhh..eeeeehhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhhhhh..eeeeeeeee.hhhhhhhhh.....----hhhhhhhhhhhhhh......eee....hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2bdt A   1 mKKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHmVVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRKK----GERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLKTNPRFIFC 176
                            |       10        20        30        40        50        60        70        80        90       100       110       120   |   130       140       150       160       170      
                            |                                     40-MSE                                                                             124  129                                               
                            1-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2BDT)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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