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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PUTATIVE COPPER HOMEOSTASIS PROTEIN CUTC FROM STREPTOCOCCUS AGALACTIAE, NORTHEAST STRUCURAL GENOMICS TARGET SAR15.
 
Authors :  F. Forouhar, M. Abashidze, S. Jayaraman, C. K. Ho, B. Cooper, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  20 Oct 05  (Deposition) - 01 Nov 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Alpha Beta Protein, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, M. Abashidze, S. Jayaraman, C. K. Ho, B. Cooper, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Putative Copper Homeostasis Protein Cutc From Streptococcus Agalactiae, Northeast Strucural Genomics Target Sar15.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - COPPER HOMEOSTASIS PROTEIN CUTC
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PET21
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: SAG1569
    Organism Scientific: STREPTOCOCCUS AGALACTIAE
    Organism Taxid: 1311
    Strain: 2603V-R

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric/Biological Unit (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2BDQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2BDQ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2BDQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2BDQ)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2BDQ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:210
 aligned with Q8DYB9_STRA5 | Q8DYB9 from UniProtKB/TrEMBL  Length:211

    Alignment length:210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
         Q8DYB9_STRA5     1 MILREFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVKQAHGTRIT 210
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee...hhhhh......eeeee.hhhhh....hhhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhhhhh...eeee.......hhhhhhhhhh..eeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2bdq A   1 mILREFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVmIRPRGGNFVYNDLELRImEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHmAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEImVGGGVTAENYQYICQETGVKQAHGTRIT 210
                            |       10        20        30        40        50        60        70       |80        90       100       110       120    |  130       140       150       160       170       180 |     190       200       210
                            |                                                         60-MSE            78-MSE                                        125-MSE                                                  182-MSE                        
                            1-MSE                                                                                                                                                                                                             


Chain B from PDB  Type:PROTEIN  Length:210
 aligned with Q8DYB9_STRA5 | Q8DYB9 from UniProtKB/TrEMBL  Length:211

    Alignment length:210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
         Q8DYB9_STRA5     1 MILREFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVKQAHGTRIT 210
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee...hhhhh......eeeee.hhhhh....hhhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhhhhh...eeee.......hhhhhhhhhh..eeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2bdq B   1 mILREFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVmIRPRGGNFVYNDLELRImEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHmAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEImVGGGVTAENYQYICQETGVKQAHGTRIT 210
                            |       10        20        30        40        50        60        70       |80        90       100       110       120    |  130       140       150       160       170       180 |     190       200       210
                            1-MSE                                                     60-MSE            78-MSE                                        125-MSE                                                  182-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2BDQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2BDQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2BDQ)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (Q8DYB9_STRA5 | Q8DYB9)
molecular function
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
biological process
    GO:0055070    copper ion homeostasis    Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.

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