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Title :   CRYSTAL STRUCTURE OF THE CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE (LPG0095) FROM LEGIONELLA PNEUMOPHILA, NORTHEAST STRUCTURAL GENOMICS TARGET LGR1

Authors :   F. Forouhar, M. Abashidze, C. K. Ho, K. Conover, T. B. Acton, G. T. Montel J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (N

Date :   20 Oct 05 (Deposition) - 06 Dec 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A
Biol. Unit 1: A  (4x)
Biol. Unit 2: A  (2x)
Biol. Unit 3: A  (2x)

Keywords :   Alpha Beta Protein, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. Forouhar, M. Abashidze, C. K. Ho, K. Conover, T. B. Acton, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The Cytosolic Imp-Gmp Specific 5'-Nucleotidase (Lpg0095) From Legionella Pneumophila, Northeast Structural Genomics Target Lgr1
To Be Published
PubMed: search

Molecule 1 - CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21
	Expression System Strain	:	XL-GOLD+MAGIC
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	3078646
	Organism Scientific	:	LEGIONELLA PNEUMOPHILA
	Organism Taxid	:	446
	Strain	:	PHILADELPHIA 1

		1
Asymmetric Unit	:	A
Biological Unit 1 (4x)	:	A
Biological Unit 2 (2x)	:	A
Biological Unit 3 (2x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 10)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 40)

No.	Name	Count	Type	Full Name
1	MSE	32	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	8	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 20)

No.	Name	Count	Type	Full Name
1	MSE	16	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 3 (2, 20)

No.	Name	Count	Type	Full Name
1	MSE	16	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	4	Ligand/Ion	SULFATE ION

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:10 , LYS A:313 , TRP A:318 , ARG A:319 , THR A:320 , CYS A:428	BINDING SITE FOR RESIDUE SO4 A 471
2	AC2	SOFTWARE	LYS A:182 , ARG A:187 , TYR A:222 , ARG A:336 , SER A:400 , PHE A:401	BINDING SITE FOR RESIDUE SO4 A 472

(no "SS Bond" information available for 2BDE)

(no "Cis Peptide Bond" information available for 2BDE)

(no "SAP(SNP)/Variant" information available for 2BDE)

(no "PROSITE Motif" information available for 2BDE)

(no "Exon" information available for 2BDE)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:458
 aligned with Q5ZZB6_LEGPH | Q5ZZB6 from UniProtKB/TrEMBL  Length:459

    Alignment length:458
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451        
         Q5ZZB6_LEGPH     2 DTHKVFVNRIINMRKIKLIGLDMDHTLIRYNSKNFESLVYDLVKERLAESFHYPEEIKKFKFNFDDAIRGLVIDSKNGNILKLSRYGAIRLSYHGTKQISFSDQKKIYRSIYVDLGDPNYMAIDTSFSIAFCILYGQLVDLKDTNPDKMPSYQAIAQDVQYCVDKVHSDGTLKNIIIKNLKKYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGEEIASQIRALPIEKKIGEAMAIKKELEQKYVDLCTRSIDESSQQYDQEIHDLQLQISTVDLQISRLLQEQNSFYNPKWERVFRAGAEESYFAYQVDRFACIYMEKLSDLLEHSPMTYFRANRRLLAHDIDI 459
               SCOP domains d2bdea1 A:2-459 Cytosolic IMP-GMP specific 5'-nucleotidase                                                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....ee...ee.....eeee.......eehhhhhhhhhhhhhhhhhhhhh..hhhhhhh..hhhhh....eee....eeeee.....eeeeee..ee.hhhhhhhhhh..........ee.....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....ee.hhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhh....hhhh.eeeeee..hhhhhhhh...eeee......eee.......eeeee.hhhhhhhhh..hhh.eeeee.....hhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee..eehhhhhhhhhhh.eee.hhhhhhhh....ee............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2bde A   2 DTHKVFVNRIINmRKIKLIGLDmDHTLIRYNSKNFESLVYDLVKERLAESFHYPEEIKKFKFNFDDAIRGLVIDSKNGNILKLSRYGAIRLSYHGTKQISFSDQKKIYRSIYVDLGDPNYmAIDTSFSIAFCILYGQLVDLKDTNPDKmPSYQAIAQDVQYCVDKVHSDGTLKNIIIKNLKKYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTmTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGEEIASQIRALPIEKKIGEAmAIKKELEQKYVDLCTRSIDESSQQYDQEIHDLQLQISTVDLQISRLLQEQNSFYNPKWERVFRAGAEESYFAYQVDRFACIYmEKLSDLLEHSPmTYFRANRRLLAHDIDI 459
                                    11  |     21  |     31        41        51        61        71        81        91       101       111       121|      131       141       151       161       171       181       191       201       211       221       231       241       251       261     | 271       281       291       301       311       321       331       341      |351       361       371       381       391       401       411       421       431       441 |     451        
                                       14-MSE    24-MSE                                                                                           122-MSE                     150-MSE                                                                                                              267-MSE                                                                          348-MSE                                                                            431-MSE     443-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

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Class: Alpha and beta proteins (a/b) (23833)

Fold: HAD-like (349)

Superfamily: HAD-like (349)

Family: 5' nucleotidase-like (3)

Protein domain: Cytosolic IMP-GMP specific 5'-nucleotidase (3)

Legionella pneumophila [TaxId: 446] (1)

d2bdea1

A:2-459

(no "CATH Domain" information available for 2BDE)

(no "Pfam Domain" information available for 2BDE)

Asymmetric Unit(hide GO term definitions)

Chain A (Q5ZZB6_LEGPH | Q5ZZB6)

molecular function
	GO:0042802		identical protein binding		Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0046872		metal ion binding		Interacting selectively and non-covalently with any metal ion.

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