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Title :  X-RAY CRYSTAL STRUCTURE OF PROTEIN AGR_C_4864 FROM AGROBACTERIUM TUMEFACIENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ATR35.
 
Authors :  F. Forouhar, M. Abashidze, J. Benach, R. Xiao, H. Janjua, K. Conover, T. G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structural Genomic Consortium (Nesg)
Date :  05 Sep 05  (Deposition) - 13 Sep 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Alpha Beta Protein. , Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, M. Abashidze, J. Benach, R. Xiao, H. Janjua, K. Conover, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Hypothetical Protein Agr_c_4864 From Agrobacterium Tumefaciens, Nesg Target Atr35
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN ATU2684
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BL21
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PET21
    Gene: MDK4.6
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR.
    Organism Taxid: 176299
    Strain: C58

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2AXO)

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:54 -A:57

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Thr A:115 -Pro A:116

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2AXO)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2AXO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:222
 aligned with A9CHH7_AGRFC | A9CHH7 from UniProtKB/TrEMBL  Length:221

    Alignment length:229
                                1                                                                                                                                                                                                                         221    
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216    |    
         A9CHH7_AGRFC     - ----MKGVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAILNGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDEVEIDIGAGNGKADVVVAYFTREQTVDVQKGENQGKKMSYWHSVYDVQTVGMWDGSPMTVKLPASVVAKVKKGGCAVLLQTANASGDPAAIVGASILLGNETQ----   -
               SCOP domains d2axoa1 A:38-262 Hypothetical protein Atu2684                                                                                                                                                                                    ---- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee......hhhhhhhhhhhhhhh..eeeeee..............hhhhhhhhhhhhhhh........eeee...eeee..hhhhhhhhhhhhhhh.......eeeee....eeeee......eeeeeeeeeeeeee..-------..eeeeeeeeeeeeeeee....eeeeehhhhhhhhh.eeeeeeeeee.....eeeeeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2axo A  38 AQEAVKGVVELFTSQGCASCPPADEALRKmIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYmRALGRNGVYTPQAILNGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDEVEIDIGAGNGKADVVVAYFTREQTVDV-------KKmSYWHSVYDVQTVGmWDGSPmTVKLPASVVAKVKKGGCAVLLQTANASGDPAAIVGASILLGNETQLEHH 266
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207   |   217       227       237       247       257         
                                                        67-MSE                               105-MSE                                                                           187     195 |           211-MSE |                                                 
                                                                                                                                                                                         197-MSE             217-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2AXO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2AXO)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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