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(-) Description

Title :  STRUCTURE OF HYPOTHETICAL PROTEIN FROM LEISHMANIA MAJOR
 
Authors :  T. L. Arakaki, E. A. Merritt, Structural Genomics Of Pathogenic Pr Consortium (Sgpp)
Date :  18 Aug 05  (Deposition) - 30 Aug 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi, Protein Structure Initiative, Structural Genomics Of Pathogenic Protozoa Consortium, Sgpp, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Arakaki, I. Le Trong, E. Phizicky, E. Quartley, G. Detitta, J. Luft A. Lauricella, L. Anderson, O. Kalyuzhniy, E. Worthey, P. J. Myler, D. Kim, D. Baker, W. G. Hol, E. A. Merritt
Structure Of Lmaj006129Aaa, A Hypothetical Protein From Leishmania Major.
Acta Crystallogr. , Sect. F V. 62 175 2006
PubMed-ID: 16511295  |  Reference-DOI: 10.1107/S1744309106005902

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3A
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LMJF36.6870
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:18 , PRO A:35 , TRP A:36 , ASP A:37 , TYR A:92BINDING SITE FOR RESIDUE GOL A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2AR1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2AR1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2AR1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:157
 aligned with Q4Q067_LEIMA | Q4Q067 from UniProtKB/TrEMBL  Length:164

    Alignment length:157
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       
         Q4Q067_LEIMA     7 RAEDIHYWLLKSEPHKFSIDDLAKQKTSPWDGVRNYAARNNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLAYDDFTALDKTSEYFDPKATKEKNPWKMVDVKFVARWDTVLTLHELKSRRELQKMALFTQSRLSVQPVSASEYAYILRMNEEQQR 163
               SCOP domains d2ar1a1 A:7-163 Hypothetical protein LmjF36.6870                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee.....hhhhhhhhheee.....hhhhhhhhhhh....eeeeee......eeeeeeeeeeeeee.hhhhh.................eeeeeeeeeeeeeeeehhhhhhhhhhh.hhhhhh....eeeehhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ar1 A   7 RAEDIHYWLLKSEPHKFSIDDLAKQKTSPWDGVRNYAARNNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLAYDDFTALDKTSEYFDPKATKEKNPWKMVDVKFVARWDTVLTLHELKSRRELQKMALFTQRRLSVQPVSASEYAYILRMNEEQQR 163
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2AR1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2AR1)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q4Q067_LEIMA | Q4Q067)
cellular component
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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