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(-) Description

Title :  X-RAY STRUCTURE OF PROTEIN FROM ARABIDOPSIS THALIANA AT4G34215 AT 1.6 ANGSTROM RESOLUTION
 
Authors :  G. E. Wesenberg, G. N. Phillips Jr. , J. G. Mccoy, E. Bitto, C. A. Bingman S. T. Allard, Center For Eukaryotic Structural Genomics (Cesg)
Date :  16 Aug 05  (Deposition) - 30 Aug 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  At4G34215, Putative Esterase, Sgnh-Hydrolase Superfamily, Carbohydrate Esterase Family 6, Structural Genomics, Protein Structure Initiative, Psi, Cesg, Center For Eukaryotic Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Bitto, C. A. Bingman, J. G. Mccoy, S. T. Allard, G. E. Wesenberg, G. N. Phillips
The Structure At 1. 6 Angstroms Resolution Of The Protein Product Of The At4G34215 Gene From Arabidopsis Thaliana.
Acta Crystallogr. , Sect. D V. 61 1655 2005
PubMed-ID: 16301800  |  Reference-DOI: 10.1107/S0907444905034074

(-) Compounds

Molecule 1 - PUTATIVE ESTERASE
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PVP 16
    Expression System Strain: B834 P(RARE2)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AT4G34215
    Organism Common: THALE CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1SEB4Mod. Amino AcidO-BENZYLSULFONYL-SERINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1SEB1Mod. Amino AcidO-BENZYLSULFONYL-SERINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1SEB1Mod. Amino AcidO-BENZYLSULFONYL-SERINE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1SEB1Mod. Amino AcidO-BENZYLSULFONYL-SERINE
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1SEB1Mod. Amino AcidO-BENZYLSULFONYL-SERINE

(-) Sites  (0, 0)

(no "Site" information available for 2APJ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2APJ)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Glu A:78 -Pro A:79
2Glu B:78 -Pro B:79
3Glu C:78 -Pro C:79
4Glu D:78 -Pro D:79

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2APJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2APJ)

(-) Exons   (0, 0)

(no "Exon" information available for 2APJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:244
 aligned with CAES_ARATH | Q8L9J9 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:244
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256    
           CAES_ARATH    17 SPIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
               SCOP domains d2apja1 A:17-260 Putative acetylxylan esterase At4g34215                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeehhhhhh...eee......eee....hhhhh....eeee.....eee..................hhhhhhhhhhhhhh.....eeeee......hhhhhh..hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee.............hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2apj A  17 SPIPPNQIFILSGQsNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
                                    26    |   36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256    
                                         31-SEB                                                                                                                                                                                                                                 


Chain A from PDB  Type:PROTEIN  Length:244
 aligned with RPKL_ARATH | Q94C77 from UniProtKB/Swiss-Prot  Length:757

    Alignment length:505
                                   198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688     
           RPKL_ARATH   189 GDIPSGFEAAQILDLSSNLLNGSLPKDLGGKSLHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSIPSTLSNPPNISETTSPAIAVKPRSTAPINPLTEKPNQTGKSKLKPSTIAAITVADIVGLAFIGLLVLYVYQVRKRRRYPESSKFSFFKFCLEKNEAKKSKPSTTEVTVPESPEAKTTCGSCIILTGGRYDETSTSESDVENQQTVQAFTRTDGGQLKQSSQTQLVTVDGETRLDLDTLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEKKQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSKVFSVDHDIDQFSNLS 693
               SCOP domains d2apj    a1 A:17-       260 Putative acetylx      ylan esterase At4g34215                                                                                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....----.eeeeeee-------hhhhhh...eee......ee------e....hhhhh....eeee.....------------------------------eee..................h-----------------------------------hhhhh--------------------------------hhhhhhhh.....eeeee-----...-----..---------------.hhhhhh.--.hhhhhh---------------------------------------------hhhhhhhhhhhh.--------eeeeeeee.------------hhhhh.hhhhhhhhh-----------hhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee...---..........hhhhhhhhhhhhhhhh-----------------------------------------hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2apj A  17 SPIPP----NQIFILSG-------QsNMAGRGGVFKDHHNNRWV------WDKILPPECAPNSSILRLSADLR------------------------------WEEAHEPLHVDIDTGKVCGVGP-----------------------------------GMAFA--------------------------------NAVKNRLETDSAVIGLVP-----CAS-----GG---------------TAIKEWER--GSHLYER---------------------------------------------MVKRTEESRKCGG--------EIKAVLWYQ------------GESDVLDIHDAESYG-----------NNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKG---LPLKSDNLHLTTEAQVQLGLSLAQAY-----------------------------------------LSNFC 260
                                |   22      |  -    ||  35        45   |     -|       59        69  |      -         -         -   |    79        89    |    -         -         -         -|   |    -         -         -       102       112    |    -| |    122         -     | 127  |  | 135 |       -         -         -         -       140       150       152      |  -       160       170   |     -     | 179       189       199       209       219       229   |   236       246        |-         -         -         -         -|    
                               21   22     29      30|                49     50                    72                             73                   94                                  95  99                              100              117   118 |   121|             123    130  |   137                                           138         150      151     159          160           174         175                                                   229 230                      255                                       256    
                                                    31-SEB                                                                                                                                                                                              120    122                       131                                                                                                                                                                                                                                                         


Chain B from PDB  Type:PROTEIN  Length:243
 aligned with CAES_ARATH | Q8L9J9 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:243
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257   
           CAES_ARATH    18 PIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
               SCOP domains d2apjb_ B: Putative acetylxylan esterase At4g34215                                                                                                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeehhhhhh...eee......eee....hhhhh....eeee.....eee..................hhhhhhhhhhhhhh.....eeeee......hhhhhh..hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee.............hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2apj B  18 PIPPNQIFILSGQsNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
                                    27   |    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257   
                                        31-SEB                                                                                                                                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:243
 aligned with RPKL_ARATH | Q94C77 from UniProtKB/Swiss-Prot  Length:757

    Alignment length:504
                                   199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689    
           RPKL_ARATH   190 DIPSGFEAAQILDLSSNLLNGSLPKDLGGKSLHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSIPSTLSNPPNISETTSPAIAVKPRSTAPINPLTEKPNQTGKSKLKPSTIAAITVADIVGLAFIGLLVLYVYQVRKRRRYPESSKFSFFKFCLEKNEAKKSKPSTTEVTVPESPEAKTTCGSCIILTGGRYDETSTSESDVENQQTVQAFTRTDGGQLKQSSQTQLVTVDGETRLDLDTLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEKKQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSKVFSVDHDIDQFSNLS 693
               SCOP domains d2ap    jb_ B: P       utative acetylxylan       esterase At4g34215                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....----.eeeeeee-------hhhhhh...eee......ee------e....hhhhh....eeee.....------------------------------eee..................h-----------------------------------hhhhh--------------------------------hhhhhhhh.....eeeee-----...-----..---------------.hhhhhh.--.hhhhhh---------------------------------------------hhhhhhhhhhhh.--------eeeeeeee.------------hhhhh.hhhhhhhhh-----------hhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee...---..........hhhhhhhhhhhhhhhh-----------------------------------------hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2apj B  18 PIPP----NQIFILSG-------QsNMAGRGGVFKDHHNNRWV------WDKILPPECAPNSSILRLSADLR------------------------------WEEAHEPLHVDIDTGKVCGVGP-----------------------------------GMAFA--------------------------------NAVKNRLETDSAVIGLVP-----CAS-----GG---------------TAIKEWER--GSHLYER---------------------------------------------MVKRTEESRKCGG--------EIKAVLWYQ------------GESDVLDIHDAESYG-----------NNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKG---LPLKSDNLHLTTEAQVQLGLSLAQAY-----------------------------------------LSNFC 260
                               |    23     |   -   ||   36        46  |     50        60        70 |       -         -         -  |     80        90   |     -         -         -        95   |     -         -         -      |103       113   |   118 |     ||-         -    |  128 |  |  136|        -         -         -         -      |141        |-       153     |   -       161       171  |      -    |  180       190       200       210       220        |-  |    237       247       | -         -         -         -       256    
                              21   22     29      30|                49     50                    72                             73                   94                                  95  99                              100              117   118 |   121|             123    130  |   137                                           138         150      151     159          160           174         175                                                   229 230                      255                                       256    
                                                   31-SEB                                                                                                                                                                                              120    122                       131                                                                                                                                                                                                                                                         


Chain C from PDB  Type:PROTEIN  Length:241
 aligned with CAES_ARATH | Q8L9J9 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:241
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 
           CAES_ARATH    20 PPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
               SCOP domains d2apjc_ C: Putative acetylxylan esterase At4g34215                                                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeehhhhhh...eeee....eeee....hhhhh....eeee.....eee..................hhhhhhhhhhhhhh.....eeeee......hhhhhh..hhhhhhhhhhhhhhh....eeeeeeee.hhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhhhhh....eeeee.............hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2apj C  20 PPNQIFILSGQsNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
                                    29 |      39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 
                                      31-SEB                                                                                                                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:241
 aligned with RPKL_ARATH | Q94C77 from UniProtKB/Swiss-Prot  Length:757

    Alignment length:498
                                   205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685        
           RPKL_ARATH   196 EAAQILDLSSNLLNGSLPKDLGGKSLHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSIPSTLSNPPNISETTSPAIAVKPRSTAPINPLTEKPNQTGKSKLKPSTIAAITVADIVGLAFIGLLVLYVYQVRKRRRYPESSKFSFFKFCLEKNEAKKSKPSTTEVTVPESPEAKTTCGSCIILTGGRYDETSTSESDVENQQTVQAFTRTDGGQLKQSSQTQLVTVDGETRLDLDTLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEKKQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSKVFSVDHDIDQFSNLS 693
               SCOP domains d2apjc_ C:        Putative acetylxyla      n esterase At4g34215                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee-------hhhhhh...eeee....eee------e....hhhhh....eeee.....------------------------------eee..................h-----------------------------------hhhhh--------------------------------hhhhhhhh.....eeeee-----...-----..---------------.hhhhhh.--.hhhhhh---------------------------------------------hhhhhhhhh....--------eeeeeeee.------------hhhhh.hhhhhhhhh-----------hhhhhhhhhhhhhhh.....eeeee......hhhhhhhhhhhh....eeeee...---..........hhhhhhhhhhhhhhhh-----------------------------------------hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2apj C  20 PPNQIFILSG-------QsNMAGRGGVFKDHHNNRWV------WDKILPPECAPNSSILRLSADLR------------------------------WEEAHEPLHVDIDTGKVCGVGP-----------------------------------GMAFA--------------------------------NAVKNRLETDSAVIGLVP-----CAS-----GG---------------TAIKEWER--GSHLYER---------------------------------------------MVKRTEESRKCGG--------EIKAVLWYQ------------GESDVLDIHDAESYG-----------NNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKG---LPLKSDNLHLTTEAQVQLGLSLAQAY-----------------------------------------LSNFC 260
                                    29       |32        42      |  -   |    56        66     |   -         -         -      | 76        86       | -         -         -         -   |   | -         -         -         -|      109       | -   | |   - ||      -       124     | 132    |    -         -         -         -         -|      147  |      - |     159         -  |    167      |  -       176       186       196       206       216       226  |   |233       243       253 |       -         -         -         -   |    
                                    29      30|                49     50                    72                             73                   94                                  95  99                              100              117   118 |   121|             123    130  |   137                                           138         150      151     159          160           174         175                                                   229 230                      255                                       256    
                                             31-SEB                                                                                                                                                                                              120    122                       131                                                                                                                                                                                                                                                         


Chain D from PDB  Type:PROTEIN  Length:238
 aligned with CAES_ARATH | Q8L9J9 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:241
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 
           CAES_ARATH    20 PPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
               SCOP domains d2apjd_ D: Putative acetylxylan esterase At4g34215                                                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeehhhhhh...eee......eee....hhhhh....eeee.....eee..................hhhhhhhhhhhhh---...eeeee......hhhhhh..hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee.............hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2apj D  20 PPNQIFILSGQsNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRL---SAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNFC 260
                                    29 |      39        49        59        69        79        89        99      |  -|      119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 
                                      31-SEB                                                                    106 110                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:238
 aligned with RPKL_ARATH | Q94C77 from UniProtKB/Swiss-Prot  Length:757

    Alignment length:498
                                   205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685        
           RPKL_ARATH   196 EAAQILDLSSNLLNGSLPKDLGGKSLHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSIPSTLSNPPNISETTSPAIAVKPRSTAPINPLTEKPNQTGKSKLKPSTIAAITVADIVGLAFIGLLVLYVYQVRKRRRYPESSKFSFFKFCLEKNEAKKSKPSTTEVTVPESPEAKTTCGSCIILTGGRYDETSTSESDVENQQTVQAFTRTDGGQLKQSSQTQLVTVDGETRLDLDTLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEKKQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSKVFSVDHDIDQFSNLS 693
               SCOP domains d2apjd_ D:        Putative acetylxyla      n esterase At4g34215                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee-------hhhhhh...eee......ee------e....hhhhh....eeee.....------------------------------eee..................h-----------------------------------hhhhhh-------hhhhhh--------------------------------------...eeeee.....---------------.hhhhhh.--.hhhhhh---------------------------------------------hhhhhhhhhhhh.--------eeeeeeee.------------hhhhh.hhhhhhhhh-----------hhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhh....eeeee...---..........hhhhhhhhhhhhhhhh-----------------------------------------hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2apj D  20 PPNQIFILSG-------QsNMAGRGGVFKDHHNNRWV------WDKILPPECAPNSSILRLSADLR------------------------------WEEAHEPLHVDIDTGKVCGVGP-----------------------------------GMAFAN-------AVKNRL--------------------------------------SAVIGLVPCASGG---------------TAIKEWER--GSHLYER---------------------------------------------MVKRTEESRKCGG--------EIKAVLWYQ------------GESDVLDIHDAESYG-----------NNMDRLIKNLRHDLNLPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKG---LPLKSDNLHLTTEAQVQLGLSLAQAY-----------------------------------------LSNFC 260
                                    29       |32        42      |  -   |    56        66     |   -         -         -      | 76        86       | -         -         -         -   |    |-      |104 |       -         -         -         -|      119  |      -       124     | 132    |    -         -         -         -         -|      147  |      - |     159         -  |    167      |  -       176       186       196       206       216       226  |   |233       243       253 |       -         -         -         -   |    
                                    29      30|                49     50                    72                             73                   94                                  95  100     101  106                                    110         122             123    130  |   137                                           138         150      151     159          160           174         175                                                   229 230                      255                                       256    
                                             31-SEB                                                                                                                                                                                                                               131
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 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2APJ)

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(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (RPKL_ARATH | Q94C77)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
biological process
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain A,B,C,D   (CAES_ARATH | Q8L9J9)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

2aea RELATED ID: GO.22797 RELATED DB: TARGETDB