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(-) Description

Title :  1.5 A CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION PA4017 FROM PSEUDOMONAS AERUGINOSA PAO1, POSSIBLE EPIMERASE
 
Authors :  R. Zhang, L. Xu, M. Cuff, A. Savchenko, M. Cymborowski, W. Minor, A. Edwa A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  23 Jun 05  (Deposition) - 09 Aug 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Pseudomonas Aeruginosa, Alpha-Beta-Alpha Sandwich, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Zhang, L. Xu, M. Cuff, A. Savchenko, M. Cymborowski, W. Minor, A. Edwards, A. Joachimiak
1. 5A Crystal Structure Of A Hypothetical Protein Pa4017 Fro Pseudomonas Aeruginosa Pao1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN PA4017
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2A35)

(-) Sites  (0, 0)

(no "Site" information available for 2A35)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:183 -B:183

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2A35)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2A35)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2A35)

(-) Exons   (0, 0)

(no "Exon" information available for 2A35)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:208
 aligned with Q9HX10_PSEAE | Q9HX10 from UniProtKB/TrEMBL  Length:213

    Alignment length:212
                                                                                                                                                                                                                                           213  
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213  
         Q9HX10_PSEAE     4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGK--   -
               SCOP domains d2a35a1 A:4-215 Hypothetical protein PA4017                                                                                                                                                                          SCOP domains
               CATH domains 2a35A00 A:4-215 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...hhhhhhhhhhhhhh....eee............ee....hhhhhhhhh.....eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhh.....eeeeee...ee.....ee.hhhh.....----hhhhhhhhhhhhhhhhhhhh....eeeeeehhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a35 A   4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIA----GKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS 215
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163      |  - |     183       193       203       213  
                                                                                                                                                                                                170  175                                        


Chain B from PDB  Type:PROTEIN  Length:208
 aligned with Q9HX10_PSEAE | Q9HX10 from UniProtKB/TrEMBL  Length:213

    Alignment length:212
                                                                                                                                                                                                                                           213  
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213  
         Q9HX10_PSEAE     4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGK--   -
               SCOP domains d2a35b_ B: Hypothetical protein PA4017                                                                                                                                                                               SCOP domains
               CATH domains 2a35B00 B:4-215 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...hhhhhhhhhhhhhh....eee............ee....hhhhhhhhh.....eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhh.....eeeeee...ee.....ee.hhhh....----.hhhhhhhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a35 B   4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI----PGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS 215
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163     |   -|      183       193       203       213  
                                                                                                                                                                                               169  174
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2A35)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2A35)

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  2a35
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