1ZRX - JenaLib

Title :   SOLUTION STRUCTURE OF STOMOXYN IN H20/TFE 50%

Authors :   C. Landon, H. Meudal, N. Boulanger, P. Bulet, F. Vovelle

Date :   23 May 05 (Deposition) - 04 Oct 05 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (10x)

Keywords :   Helical Peptide In Tfe, Antimicrobial Protein, Antibiotic (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Landon, H. Meudal, N. Boulanger, P. Bulet, F. Vovelle
Solution Structures Of Stomoxyn And Spinigerin, Two Insect Antimicrobial Peptides With An Alpha-Helical Conformation.
Biopolymers V. 81 92 2006
PubMed-ID: 16170803 | Reference-DOI: 10.1002/BIP.20370
(for further references see the PDB file header)

Compounds

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Chain A from PDB  Type:PROTEIN  Length:42
 aligned with STMX_STOCA | Q8T9R8 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:42
                                    34        44        54        64  
            STMX_STOCA   25 RGFRKHFNKLVKKVKHTISETAHVAKDTAVIAGSGAAVVAAT 66
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains Stomoxyn-1zrxA01 A:1-42                    Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                  1zrx A  1 RGFRKHFNKLVKKVKHTISETAHVAKDTAVIAGSGAAVVAAT 42
                                    10        20        30        40

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Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (1, 1)

Gene Ontology (8, 8)

NMR Structure(hide GO term definitions)

Chain A (STMX_STOCA | Q8T9R8)

molecular function
	GO:0003674	molecular_function	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
	GO:0042742	defense response to bacterium	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
	GO:0050832	defense response to fungus	Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
	GO:0002376	immune system process	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.
	GO:0045087	innate immune response	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
	GO:0031640	killing of cells of other organism	Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
	GO:0006805	xenobiotic metabolic process	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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