Chain A from PDB Type:PROTEIN Length:173
aligned with O96555_PLAVI | O96555 from UniProtKB/TrEMBL Length:219
Alignment length:173
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
O96555_PLAVI 23 AVTVDTICKNGQLVQMSNHFKCMCNEGLVHLSENTCEEKNECKKETLGKACGEFGQCIENPDPAQVNMYKCGCIEGYTLKEDTCVLDVCQYKNCGESGECIVEYLSEIQSAGCSCAIGKVPNPEDEKKCTKTGETACQLKCNTDNEVCKNVEGVYKCQCMEGFTFDKEKNVCL 195
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............................eeee..eee............eee..eeeee.........eeeee...eee....eee.hhh........eeeeehhhhh.eeeee.....eeehhhh.eeee................eeee..eeee......ee......ee Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g A 1 AVTVDTICKNGQLVQMSNHFKCMCNEGLVHLSENTCEEKNECKKETLGKACGEFGQCIENPDPAQVNMYKCGCIEGYTLKEDTCVLDVCQYKNCGESGECIVEYLSEIQSAGCSCAIGKVPNPEDEKKCTKTGETACQLKCNTDNEVCKNVEGVYKCQCMEGFTFDKEKNVCL 173
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170
Chain B from PDB Type:PROTEIN Length:173
aligned with O96555_PLAVI | O96555 from UniProtKB/TrEMBL Length:219
Alignment length:173
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
O96555_PLAVI 23 AVTVDTICKNGQLVQMSNHFKCMCNEGLVHLSENTCEEKNECKKETLGKACGEFGQCIENPDPAQVNMYKCGCIEGYTLKEDTCVLDVCQYKNCGESGECIVEYLSEIQSAGCSCAIGKVPNPEDEKKCTKTGETACQLKCNTDNEVCKNVEGVYKCQCMEGFTFDKEKNVCL 195
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Plasmod_Pvs28-1z3gB01 B:1-173 Pfam domains (1)
Pfam domains (2) Plasmod_Pvs28-1z3gB02 B:1-173 Pfam domains (2)
Sec.struct. author .............eee..eee......eeeee..eeee...........eee..eeeee.........eeeee...eee....eee...........eeee..hhhhh...eeee......hhhhh....................eee......eee............... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g B 1 AVTVDTICKNGQLVQMSNHFKCMCNEGLVHLSENTCEEKNECKKETLGKACGEFGQCIENPDPAQVNMYKCGCIEGYTLKEDTCVLDVCQYKNCGESGECIVEYLSEIQSAGCSCAIGKVPNPEDEKKCTKTGETACQLKCNTDNEVCKNVEGVYKCQCMEGFTFDKEKNVCL 173
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170
Chain H from PDB Type:PROTEIN Length:214
SCOP domains -----------------------------------------------------------------------------------------------------------------d1z3gh1 H:116-216 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1z3gH01 H:3-115 Immunoglobulins 1z3gH02 H:116-214 Immunoglobulins -- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee.....eeee......hhhhh.eeeeee.....eeeeeeee....eeee.......eeeeee....eeeeee...hhhhh.eeeeee..........eeeee........eeeee..........eeeeeeeeeee.....eeee.........ee...ee....eeeeeeeeee.hhhhhh..eeeeeehhh.eeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g H 3 QLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIHPHSGSTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGWDVAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD 216
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
Chain I from PDB Type:PROTEIN Length:214
SCOP domains -----------------------------------------------------------------------------------------------------------------d1z3gi1 I:116-216 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1z3gI01 I:3-115 Immunoglobulins 1z3gI02 I:116-214 Immunoglobulins -- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee...eeee.....eeee.ee.........eeeeee......eeeeee......eee.........ee.hhhhh..eeee.........eeeeee..........eeeee.........eeee...........eeeeeeeeee.......ee.hhh....eeeeeeeee..eeeeeeeeee..........eeeeee....eeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g I 3 QLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIHPHSGSTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGWDVAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD 216
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
Chain L from PDB Type:PROTEIN Length:213
SCOP domains d1z3gl1 L:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa d1z3gl2 L:107-213 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1z3gL01 L:1-107 Immunoglobulins 1z3gL02 L:108-210 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eee..eeee.....eeeeeeeeeee...eeeee......eeeee...ee.......eeeeeeeeeeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee.....eee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g L 1 QIVLTQSPAIMSASPGEKVTMTCSASSSVSYMNWYQQKSGTSPKRWIYDTSKLASGVPAHFRGSGSGTSYSLTISGMEAEDAATYYCQQWSSNPPTFGSGTKLEINRADTAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 213
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain M from PDB Type:PROTEIN Length:213
SCOP domains d1z3gm1 M:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa d1z3gm2 M:107-213 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1z3gM01 M:1-107 Immunoglobulins 1z3gM02 M:108-210 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeeeeeee...eeeee......eeeee...ee.......eeeeeeeeeeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee.....eee.........eeeeeeeeeehhhhhh..eeeeeeee..eeeeeeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1z3g M 1 QIVLTQSPAIMSASPGEKVTMTCSASSSVSYMNWYQQKSGTSPKRWIYDTSKLASGVPAHFRGSGSGTSYSLTISGMEAEDAATYYCQQWSSNPPTFGSGTKLEINRADTAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 213
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |