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(-) Description

Title :  CRYSTAL STRUCTURE OF PHOSPHATASE SPY1043 FROM STREPTOCOCCUS PYOGENES
 
Authors :  A. A. Fedorov, E. V. Fedorov, S. C. Almo, S. K. Burley, New York Sgx Res Center For Structural Genomics (Nysgxrc)
Date :  07 Feb 05  (Deposition) - 15 Feb 05  (Release) - 14 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.56
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Nysgxrc Target T2098, Unknown Function, Psi, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgrc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Fedorov, E. V. Fedorov, S. C. Almo
Crystal Structure Of Hypothetical Protein Spy1043 From Streptococcus Pyogenes
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN SPY1043
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: STREPTOCOCCUS PYOGENES
    Organism Taxid: 160490
    Strain: M1 GAS

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1YS9)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys A:181 -Pro A:182

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:253
 aligned with Q99ZW4_STRP1 | Q99ZW4 from UniProtKB/TrEMBL  Length:254

    Alignment length:253
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251   
         Q99ZW4_STRP1     2 PYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL 254
               SCOP domains d1ys9a1 A:2-254 Hypothetical protein SPy1043                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------1ys9A02 A:84-179 4-nitrophenylphosphatase; domain 2                                             --------------------------------------------------------------------------- CATH domains
               Pfam domains ----Hydrolase_6-1ys9A01 A:6-107                                                                           ----------------------------------------------------------------------Hydrolase_like-1ys9A02 A:178-252                                           -- Pfam domains
         Sec.struct. author ...eeee......ee..eehhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhh....hhh.eeehhhhhhhhhhhhh...eeeee.hhhhhhhhhhh..ee......eeee......hhhhhhhhhhhhhh..eeee.....eee....eeehhhhhhhhhhhhhh...ee....hhhhhhhhhhhhh.hhh.eeeee....hhhhhhhh...eeeee.....hhhhhhhh.....eee.hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ys9 A   2 PYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL 254
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 2)

Asymmetric/Biological Unit
(-)
Clan: HAD (186)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Lys A:181 - Pro A:182   [ RasMol ]  
 

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