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(-) Description

Title :  BETA-GALACTOSIDASE FROM ARTHROBACTER SP. C2-2 (ISOENZYME C2-2-1)
 
Authors :  T. Skalova, J. Dohnalek, V. Spiwok, P. Lipovova, E. Vondrackova, H. Petrokova, H. Strnad, B. Kralova, J. Hasek
Date :  01 Feb 05  (Deposition) - 04 Oct 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Glycosyl Hydrolase Family 2; Tim Barrel; Hexamer (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Skalova, J. Dohnalek, V. Spiwok, P. Lipovova, E. Vondrackova, H. Petrokova, J. Duskova, H. Strnad, B. Kralova, J. Hasek
Cold-Active Beta-Galactosidase From Arthrobacter Sp. C2-2 Forms Compact 660Kda Hexamers: Crystal Structure At 1. 9A Resolution
J. Mol. Biol. V. 353 282 2005
PubMed-ID: 16171818  |  Reference-DOI: 10.1016/J.JMB.2005.08.028
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BETA-GALACTOSIDASE
    Chains: A, B, C, D, E, F
    EC Number: 3.2.1.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET16B
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: LACZ
    Mutation: YES
    Organism Scientific: ARTHROBACTER SP. C2-2
    Organism Taxid: 192168

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 41)

Asymmetric/Biological Unit (5, 41)
No.NameCountTypeFull Name
1CL6Ligand/IonCHLORIDE ION
2MG6Ligand/IonMAGNESIUM ION
3NA12Ligand/IonSODIUM ION
4PEG6Ligand/IonDI(HYDROXYETHYL)ETHER
5SO411Ligand/IonSULFATE ION

(-) Sites  (41, 41)

Asymmetric Unit (41, 41)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA A:525 , GLY A:527 , GLY A:529 , HOH A:9069 , HOH A:9635BINDING SITE FOR RESIDUE MG A 7001
02AC2SOFTWAREASP A:201 , TRP A:552 , PHE A:585 , ASP A:588 , HOH A:9751 , HOH A:9788BINDING SITE FOR RESIDUE NA A 7501
03AC3SOFTWARETHR A:99 , ASN A:100 , ASP A:199 , GLN A:200 , HOH A:9678BINDING SITE FOR RESIDUE NA A 7511
04AC4SOFTWAREARG A:761 , THR A:811 , ARG A:812BINDING SITE FOR RESIDUE CL A 8011
05AC5SOFTWAREARG A:228 , ARG A:314 , SER A:462 , HOH A:2036 , HOH A:9082 , HOH A:9193 , HOH A:9673 , HOH A:9904BINDING SITE FOR RESIDUE SO4 A 8501
06AC6SOFTWARETRP A:226 , LEU A:227 , THR A:229 , ARG A:311 , LYS A:429 , ASN A:430 , HIS A:431 , PRO A:432 , ARG A:463 , HOH A:9153 , HOH A:9546 , HOH A:9895BINDING SITE FOR RESIDUE SO4 A 8511
07AC7SOFTWARETRP A:203 , HIS A:335 , THR A:337 , HIS A:338 , PRO A:339 , ARG A:343 , HIS A:557 , GLY A:558 , ILE A:559 , HOH A:9463BINDING SITE FOR RESIDUE PEG A 9001
08AC8SOFTWAREALA B:525 , GLY B:527 , GLY B:529 , HOH B:9124 , HOH B:9630BINDING SITE FOR RESIDUE MG B 7002
09AC9SOFTWAREASP B:201 , TRP B:552 , PHE B:585 , ASP B:588 , HOH B:9824 , HOH B:9825BINDING SITE FOR RESIDUE NA B 7502
10BC1SOFTWARETHR B:99 , ASN B:100 , ASP B:199 , GLN B:200BINDING SITE FOR RESIDUE NA B 7512
11BC2SOFTWAREARG B:761 , THR B:811 , ARG B:812 , HOH B:9903BINDING SITE FOR RESIDUE CL B 8012
12BC3SOFTWAREARG B:228 , ARG B:314 , SER B:462 , HOH B:9085 , HOH B:9391 , HOH B:9612BINDING SITE FOR RESIDUE SO4 B 8502
13BC4SOFTWARETRP B:226 , LEU B:227 , ARG B:228 , THR B:229 , ARG B:311 , LYS B:429 , ASN B:430 , HIS B:431 , PRO B:432 , ARG B:463 , HOH B:9058 , HOH B:9429 , HOH B:9450 , HOH B:9921BINDING SITE FOR RESIDUE SO4 B 8512
14BC5SOFTWAREGLN B:202 , TRP B:203 , LEU B:205 , HIS B:335 , THR B:337 , HIS B:338 , PRO B:339 , ARG B:343 , HIS B:557 , GLY B:558 , ILE B:559 , HOH B:9503BINDING SITE FOR RESIDUE PEG B 9002
15BC6SOFTWAREALA C:525 , GLY C:527 , GLY C:529 , HOH C:9034 , HOH C:9817 , HOH C:9929BINDING SITE FOR RESIDUE MG C 7003
16BC7SOFTWARETYR C:98 , ASP C:201 , PHE C:585 , ASP C:588 , HOH C:9524 , HOH C:9818BINDING SITE FOR RESIDUE NA C 7503
17BC8SOFTWARETHR C:99 , ASN C:100 , ASP C:199 , GLN C:200BINDING SITE FOR RESIDUE NA C 7513
18BC9SOFTWAREARG C:761 , THR C:811 , ARG C:812BINDING SITE FOR RESIDUE CL C 8013
19CC1SOFTWARETRP C:226 , LEU C:227 , THR C:229 , ARG C:311 , LYS C:429 , ASN C:430 , HIS C:431 , PRO C:432 , ARG C:463 , HOH C:2112 , HOH C:9124 , HOH C:9474 , HOH C:9579BINDING SITE FOR RESIDUE SO4 C 8513
20CC2SOFTWAREGLN C:202 , TRP C:203 , HIS C:335 , THR C:337 , HIS C:338 , GLY C:342 , ARG C:343 , HIS C:557 , GLY C:558BINDING SITE FOR RESIDUE PEG C 9003
21CC3SOFTWAREALA D:525 , GLY D:527 , GLY D:529 , HOH D:9445 , HOH D:9826BINDING SITE FOR RESIDUE MG D 7004
22CC4SOFTWARETYR D:98 , ASP D:201 , PHE D:585 , ASP D:588 , HOH D:9559 , HOH D:9827BINDING SITE FOR RESIDUE NA D 7504
23CC5SOFTWARETHR D:99 , ASN D:100 , ASP D:199 , GLN D:200 , HOH D:9624BINDING SITE FOR RESIDUE NA D 7514
24CC6SOFTWAREARG D:761 , THR D:811 , ARG D:812BINDING SITE FOR RESIDUE CL D 8014
25CC7SOFTWAREARG D:228 , ARG D:314 , SER D:462 , HOH D:9041 , HOH D:9453 , HOH D:9683BINDING SITE FOR RESIDUE SO4 D 8504
26CC8SOFTWARETRP D:226 , LEU D:227 , ARG D:228 , THR D:229 , ARG D:311 , LYS D:429 , ASN D:430 , HIS D:431 , PRO D:432 , ARG D:463 , HOH D:2050 , HOH D:9211 , HOH D:9489 , HOH D:9683BINDING SITE FOR RESIDUE SO4 D 8514
27CC9SOFTWAREGLN D:202 , TRP D:203 , LEU D:205 , HIS D:335 , THR D:337 , HIS D:338 , PRO D:339 , ARG D:343 , HIS D:557 , GLY D:558 , HOH D:9746BINDING SITE FOR RESIDUE PEG D 9004
28DC1SOFTWAREALA E:525 , GLY E:527 , GLY E:529 , HOH E:9034 , HOH E:9801BINDING SITE FOR RESIDUE MG E 7005
29DC2SOFTWARETYR E:98 , ASP E:201 , PHE E:585 , ASP E:588 , HOH E:9802BINDING SITE FOR RESIDUE NA E 7505
30DC3SOFTWARETHR E:99 , ASN E:100 , ASP E:199 , GLN E:200BINDING SITE FOR RESIDUE NA E 7515
31DC4SOFTWAREARG E:761 , THR E:811 , ARG E:812BINDING SITE FOR RESIDUE CL E 8015
32DC5SOFTWAREARG E:228 , ARG E:314 , SER E:462 , HOH E:9047 , HOH E:9406 , HOH E:9645BINDING SITE FOR RESIDUE SO4 E 8505
33DC6SOFTWARETRP E:226 , LEU E:227 , ARG E:228 , THR E:229 , ARG E:311 , LYS E:429 , ASN E:430 , HIS E:431 , PRO E:432 , ARG E:463 , HOH E:9241 , HOH E:9631 , HOH E:9974BINDING SITE FOR RESIDUE SO4 E 8515
34DC7SOFTWAREGLN E:202 , TRP E:203 , HIS E:335 , THR E:337 , HIS E:338 , PRO E:339 , GLY E:342 , ARG E:343 , HIS E:557 , GLY E:558 , ILE E:559BINDING SITE FOR RESIDUE PEG E 9005
35DC8SOFTWAREALA F:525 , GLY F:527 , GLY F:529 , HOH F:9016 , HOH F:9255BINDING SITE FOR RESIDUE MG F 7006
36DC9SOFTWARETYR F:98 , ASP F:201 , PHE F:585 , ASP F:588 , HOH F:9502 , HOH F:9808BINDING SITE FOR RESIDUE NA F 7506
37EC1SOFTWARETHR F:99 , ASN F:100 , ASP F:199 , GLN F:200 , HOH F:9930BINDING SITE FOR RESIDUE NA F 7516
38EC2SOFTWAREARG F:761 , THR F:811 , ARG F:812BINDING SITE FOR RESIDUE CL F 8016
39EC3SOFTWAREARG F:228 , THR F:229 , ARG F:314 , SER F:462 , HOH F:9617 , HOH F:9900 , HOH F:9933BINDING SITE FOR RESIDUE SO4 F 8506
40EC4SOFTWARELEU F:227 , THR F:229 , GLY F:309 , ARG F:311 , LYS F:429 , ASN F:430 , PRO F:432 , ARG F:463 , HOH F:9130 , HOH F:9184 , HOH F:9390 , HOH F:9933BINDING SITE FOR RESIDUE SO4 F 8516
41EC5SOFTWAREGLN F:202 , TRP F:203 , HIS F:335 , THR F:337 , HIS F:338 , PRO F:339 , ARG F:343 , HIS F:557 , GLY F:558 , ILE F:559 , HOH F:9367BINDING SITE FOR RESIDUE PEG F 9006

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1YQ2)

(-) Cis Peptide Bonds  (54, 54)

Asymmetric/Biological Unit
No.Residues
1Val A:81 -Pro A:82
2Pro A:109 -Pro A:110
3Glu A:147 -Ser A:148
4Phe A:253 -Pro A:254
5Ser A:368 -His A:369
6Gly A:529 -Pro A:530
7Trp A:552 -Glu A:553
8Gly A:759 -Pro A:760
9Gly A:890 -Pro A:891
10Val B:81 -Pro B:82
11Pro B:109 -Pro B:110
12Glu B:147 -Ser B:148
13Phe B:253 -Pro B:254
14Ser B:368 -His B:369
15Gly B:529 -Pro B:530
16Trp B:552 -Glu B:553
17Gly B:759 -Pro B:760
18Gly B:890 -Pro B:891
19Val C:81 -Pro C:82
20Pro C:109 -Pro C:110
21Glu C:147 -Ser C:148
22Phe C:253 -Pro C:254
23Ser C:368 -His C:369
24Gly C:529 -Pro C:530
25Trp C:552 -Glu C:553
26Gly C:759 -Pro C:760
27Gly C:890 -Pro C:891
28Val D:81 -Pro D:82
29Pro D:109 -Pro D:110
30Glu D:147 -Ser D:148
31Phe D:253 -Pro D:254
32Ser D:368 -His D:369
33Gly D:529 -Pro D:530
34Trp D:552 -Glu D:553
35Gly D:759 -Pro D:760
36Gly D:890 -Pro D:891
37Val E:81 -Pro E:82
38Pro E:109 -Pro E:110
39Glu E:147 -Ser E:148
40Phe E:253 -Pro E:254
41Ser E:368 -His E:369
42Gly E:529 -Pro E:530
43Trp E:552 -Glu E:553
44Gly E:759 -Pro E:760
45Gly E:890 -Pro E:891
46Val F:81 -Pro F:82
47Pro F:109 -Pro F:110
48Glu F:147 -Ser F:148
49Phe F:253 -Pro F:254
50Ser F:368 -His F:369
51Gly F:529 -Pro F:530
52Trp F:552 -Glu F:553
53Gly F:759 -Pro F:760
54Gly F:890 -Pro F:891

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1YQ2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1YQ2)

(-) Exons   (0, 0)

(no "Exon" information available for 1YQ2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2a3 A:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2a2 A:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2a5 A:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2a1 A:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2a4 A:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2A01 A:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2A03 A:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.....ee.........ee...eee..eeeeeeee.....hhhhh.........hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee.....eeeeeeeee......eeeeeeeee.hhhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeee....eeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.........eeeeeeeee..eeeeeeeee............eeeee...........eeeeeeeee...........eeeeeeee.......................ee..eeee..eeeee..ee.eeeeee......hhhhh............hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee............hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 A    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023


Chain B from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2b3 B:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2b2 B:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2b5 B:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2b1 B:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2b4 B:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2B01 B:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2B03 B:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.....ee.........ee...eee..eeeeeeee...................hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee...eeeeeeeeeee......eeeeeeeeee.hhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeee....eeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.........eeeeeeeee..eeeeeeeee.ee..ee.....eeeee...........eeeeeeeee...........eeeeeeee.......................ee..eeee..eeeee..ee.eeeeee.......................hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee............hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 B    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023


Chain C from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2c3 C:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2c2 C:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2c5 C:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2c1 C:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2c4 C:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2C01 C:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2C03 C:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.....ee.........ee...eee..eeeeeeee.....hhhhh.........hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee..eeeee..eeeeee......eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee...eeeeeeeeeee......eeeeeeeeee.hhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeee....eeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee......hhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.....hhh.eeeeeeeee..eeeeeeeee............eeeee...........eeeeeeeee...........eeeeeeee.......................ee..eeee..eeeee..ee.eeeeee......hhhhh............hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee....hhhhh...hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 C    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023


Chain D from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2d3 D:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2d2 D:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2d5 D:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2d1 D:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2d4 D:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2D01 D:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2D03 D:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.....ee.........ee...eee..eeeeeeee...................hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee...eeeeeeeeeee......eeeeeeeeee.hhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeee....eeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee......hhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.....hhh.eeeeeeeee..eeeeeeeee............eeeee...........eeeeeeeee...........eeeeeeee.......................ee..eeee..eeeee..ee.eeeeee......hhhhh............hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee....hhhhh...hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 D    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023


Chain E from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2e3 E:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2e2 E:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2e5 E:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2e1 E:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2e4 E:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2E01 E:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2E03 E:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.....ee.........ee...eee..eeeeeeee...................hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee...eeeeeeeeeee......eeeeeeeeee.hhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeee....eeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.....hhh.eeeeeeeee..eeeeeeeee.ee..ee.....eeeee...........eeeeeeeee...........eeeeeeee.......................ee..eeee..eeeee..ee.eeeeee......hhhhh............hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee............hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 E    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023


Chain F from PDB  Type:PROTEIN  Length:1020
 aligned with Q8KRF6_9MICC | Q8KRF6 from UniProtKB/TrEMBL  Length:1023

    Alignment length:1020
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
        Q8KRF6_9MICC      4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATVVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
               SCOP domains d1yq2f3 F:4-219 beta-Galactosidase                                                                                                                                                                                      d1yq2f2 F:220-312 beta-Galactosidase, domains 2 and 4                                        d1yq2f5 F:313-609 beta-Galactosidase, domain 3                                                                                                                                                                                                                                                           d1yq2f1 F:610-721 beta-Galactosidase, domains 2 and 4                                                           d1yq2f4 F:722-1023 beta-Galactosidase, domain 5                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1yq2F01 F:4-218 Galactose-binding domain-like                                                                                                                                                                          ---------------------------------------------------------------------------------------------1yq2F03 F:312-608 Glycosidases                                                                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------Glyco_hydro_2_N-1yq2F01 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F13 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F07 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (1)
           Pfam domains (2) --------------------------Glyco_hydro_2_N-1yq2F02 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F14 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F08 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (2)
           Pfam domains (3) --------------------------Glyco_hydro_2_N-1yq2F03 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F15 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F09 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (3)
           Pfam domains (4) --------------------------Glyco_hydro_2_N-1yq2F04 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F16 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F10 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (4)
           Pfam domains (5) --------------------------Glyco_hydro_2_N-1yq2F05 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F17 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F11 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (5)
           Pfam domains (6) --------------------------Glyco_hydro_2_N-1yq2F06 F:30-218                                                                                                                                                             ----------------------------------------------------------------------------------------------Glyco_hydro_2_C-1yq2F18 F:313-613                                                                                                                                                                                                                                                                            ------------------------------------------------------------------------------------------------------------------------------Bgal_small_N-1yq2F12 F:740-1021                                                                                                                                                                                                                                                           -- Pfam domains (6)
         Sec.struct. author ..hhhhh....eee.........ee...eee..eeeeeeee.....hhhhh.........hhhhh........eeeee...............eee..................eeeeeeeeeehhhhhh..eeeeeeee..ee..eeeee..eeeeee......eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeeee.....eeeeeeeee......eeeeeeeee.hhhhh.eeeeehhhheeeee.hhhhh..eee.............eeeeeee..eeeeeee....eeee..eeee..ee..eeeeee...........hhhhhhhhhhhhhhh...eeee......hhhhhhhhhhh.eeeee....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee............eeee..hhhhhhhhhh..........hhhhhhhhh...eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh..........hhhhhhhhhhh..eeeeee.......eeeeee.........eeeeeeeee..eeeeeeeee............eeeee...........eeeeeeeee..........eeeeeeeee.......................ee..eeee..eeeee..ee.eeeeee......hhhhh............hhhhh.....hhhhhhhhhhhh.eeeeeeeeeee..eeeeeeeeee......eeeeeeeeee..eeeeeeeeee.........eeeeeeee...eeeeeeeeee............eeeeeeeehhhhh................eeeeee..eeeeeeeee........eeeee..hhhhhhhh.hhhhh.....eeeeeeeee............hhhhh.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1yq2 F    4 ADVSYLTDQGPGSGRRVPARSWLHSDAPALSLNGDWRFRLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRVHQWSAASYLEDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITADATAFPVTLSVPELGVNVTWKSAEEVAPLALENVEPWSAEVPRLYEASVSSAAESISVRLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVSPIRLGLSLPAGGKPTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVPTRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQPVSGPRLELWRAPTDNDRGAGFGAYGPGDPWLNSGRGVPAPSSEAVWKQAGLDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDGGELCLRIDITPSAGWNLVWPRIGVRWDLPTDVDGAAWFGAGPRESYPDSMHATMVARHAASLEELNVPYARPQETGHRSDVRWLELDRAGAPWLRIDAEPDAAGRRPGFSLARHTAQEIAAAGHPHELPTPSHSYLYVDAAQHGLGSRACGPDVWPDFALRPEARTLKLRISPA 1023
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 30)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Alpha-Beta Barrel (2994)
(-)
Topology: TIM Barrel (2806)
(-)
Homologous Superfamily: Glycosidases (843)
(-)
C2-2 (Arthrobacter sp) (1)
1a1yq2A03A:312-608
1b1yq2B03B:312-608
1c1yq2C03C:312-608
1d1yq2D03D:312-608
1e1yq2E03E:312-608
1f1yq2F03F:312-608
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (3, 18)

Asymmetric/Biological Unit
(-)
Clan: GBD (153)
(-)
Clan: Gal_mutarotase (81)
(-)
Clan: Glyco_hydro_tim (488)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q8KRF6_9MICC | Q8KRF6)
molecular function
    GO:0004565    beta-galactosidase activity    Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0009341    beta-galactosidase complex    A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.

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 Related Entries

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