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(-) Description

Title :  PREDICTED CODING REGION AF0941 FROM ARCHAEOGLOBUS FULGIDUS
 
Authors :  V. V. Lunin, R. Zhang, A. Savchenko, A. M. Edwards, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  28 Jan 05  (Deposition) - 08 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Af0941, Apc5573, Midwest Center For Structural Genomics, Mcsg, Protein Structure Initiative, Psi, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. V. Lunin, E. Botchkareva, R. Zhang, A. Joachimiak, A. M. Edwards, A. Savchenko
The Crystal Structure Of Predicted Coding Region Af0941 From Archaeoglobus Fulgidus
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN AF0941
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: MODIFIED PET15B
    Expression System Strain: BL21 DE3
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: ARCHAEOGLOBUS FULGIDUS
    Organism Taxid: 2234

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:113
 aligned with Y941_ARCFU | O29321 from UniProtKB/Swiss-Prot  Length:114

    Alignment length:116
                              1                                                                                                                 
                              |      8        18        28        38        48        58        68        78        88        98       108      
           Y941_ARCFU     - --MLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKGFKIEKKLDPEVINEIALYIDRVEKEV 114
               SCOP domains --d1yoza1 A:11-124 Hypothetical protein AF0941                                                                       SCOP domains
               CATH domains 1yozA00 A:9-124 Hypothetical protein af0941                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..---....hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 1yoz A   9 GHMLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKG---EKKLDPEVINEIALYIDRVEKEV 124
                                    18        28        38        48        58        68        78        88        98   |   108       118      
                                                                                                                    98 102                      


Chain B from PDB  Type:PROTEIN  Length:116
 aligned with Y941_ARCFU | O29321 from UniProtKB/Swiss-Prot  Length:114

    Alignment length:116
                              1                                                                                                                 
                              |      8        18        28        38        48        58        68        78        88        98       108      
           Y941_ARCFU     - --MLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKGFKIEKKLDPEVINEIALYIDRVEKEV 114
               SCOP domains d1yozb_ B: Hypothetical protein AF0941                                                                               SCOP domains
               CATH domains 1yozB00 B:9-124 Hypothetical protein af0941                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 1yoz B   9 GHMLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKGFKIEKKLDPEVINEIALYIDRVEKEV 124
                                    18        28        38        48        58        68        78        88        98       108       118
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

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