Chain A from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 A 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Chain B from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 B 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Chain D from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 D 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Chain E from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 E 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Chain F from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 F 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Chain G from PDB Type:PROTEIN Length:27
aligned with Q80BK4_SHV2 | Q80BK4 from UniProtKB/TrEMBL Length:99
Alignment length:27
48 58
Q80BK4_SHV2 39 GPPGPPGPPGPPGPPGPPGPPGPPGPP 65
SCOP domains --------------------------- SCOP domains
CATH domains --------------------------- CATH domains
Pfam domains --------------------------- Pfam domains
Sec.struct. author ........................... Sec.struct. author
SAPs(SNPs) --------------------------- SAPs(SNPs)
PROSITE --------------------------- PROSITE
Transcript --------------------------- Transcript
1ym8 G 3 GppGppGppGppGppGppGppGppGpp 29
|| || |12|| || ||22| || ||
|| || || || 17-HYP|| || ||
4-HYP || || | 19-HYP || ||
5-HYP|| || | 20-HYP|| ||
7-HYP || | 22-HYP ||
8-HYP|| | 23-HYP||
10-HYP | 25-HYP
11-HYP| 26-HYP
13-HYP 28-HYP
14-HYP 29-HYP
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |