1YLX - JenaLib

Title :   CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION FROM BACILLUS STEAROTHERMOPHILUS

Authors :   Midwest Center For Structural Genomics (Mcsg)

Date :   19 Jan 05 (Deposition) - 31 May 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym./Biol. Unit : A,B

Keywords :   Hypothetical Protein, Bacillus Stearothermophilus, Dimer, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. E. C. Duke, S. Moy, H. Li, F. Collart, A. Joachimiak
Crystal Structure Of Apc35702, A Hypothetical Protein From Bacillus Stearothermophilus
To Be Published
PubMed: search
(for further references see the PDB file header)

Compounds

Molecule 1 - HYPOTHETICAL PROTEIN APC35702
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PMCSG7
	Organism Scientific	:	GEOBACILLUS STEAROTHERMOPHILUS
	Organism Taxid	:	1422

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 12)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:100
 aligned with Q5KZY7_GEOKA | Q5KZY7 from UniProtKB/TrEMBL  Length:100

    Alignment length:100
                                    10        20        30        40        50        60        70        80        90       100
         Q5KZY7_GEOKA     1 MEFAPRSVVIEEFIDTLEPMMEAYGLDQVGIFEEHGEGNRYYIGYTINKDDEMITIHMPFVKNERGELALEKQEWTVRKDGREKKGFHSLQEAMEEVIHS 100
               SCOP domains d1ylxa1 A:1-100 Hypothetical protein, GK1464 ortholog                                                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhh...eeeeeee....eeeeeeeeee..eeeeeeeeeee.....eee....eeeee..eeeeee.hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 1ylx A   1 mEFAPRSVVIEEFIDTLEPmmEAYGLDQVGIFEEHGEGNRYYVGYTINKDDEmITIHmPFVKNERGELALEKQEWTVRKDGREKKGFHSLQEAmEEVIHS 100
                            |       10        20|       30        40        50  |    |60        70        80        90   |   100
                            |                 20-MSE                           53-MSE|                                  94-MSE  
                            1-MSE              21-MSE                               58-MSE

Chain B from PDB  Type:PROTEIN  Length:100
 aligned with Q5KZY7_GEOKA | Q5KZY7 from UniProtKB/TrEMBL  Length:100

    Alignment length:100
                                    10        20        30        40        50        60        70        80        90       100
         Q5KZY7_GEOKA     1 MEFAPRSVVIEEFIDTLEPMMEAYGLDQVGIFEEHGEGNRYYIGYTINKDDEMITIHMPFVKNERGELALEKQEWTVRKDGREKKGFHSLQEAMEEVIHS 100
               SCOP domains d1ylxb_ B: automated matches                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhh...eeeeeee....eeeeeeeeee..eeeeeeeeeee.....eee....eeeee..eeeeee.hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 1ylx B   1 mEFAPRSVVIEEFIDTLEPmmEAYGLDQVGIFEEHGEGNRYYVGYTINKDDEmITIHmPFVKNERGELALEKQEWTVRKDGREKKGFHSLQEAmEEVIHS 100
                            |       10        20|       30        40        50  |    |60        70        80        90   |   100
                            1-MSE             20-MSE                           53-MSE|                                  94-MSE  
                                               21-MSE                               58-MSE

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (2, 2)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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