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(-) Description

Title :  THE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDRODIPICOLINATE REDUCTASE (RV2773C) IN COMPLEX WITH NADH (CRYSTAL FORM C)
 
Authors :  R. Janowski, G. Kefala, M. S. Weiss, Tb Structural Genomics Consort (Tbsgc)
Date :  19 Jan 05  (Deposition) - 17 Jan 06  (Release) - 30 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.34
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Lysine Biosynthesis, Dihydrodipicolinate, Reductase, Nadh, Structural Genomics, Psi, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. Janowski, G. Kefala, M. S. Weiss
The Structure Of Dihydrodipicolinate Reductase (Dapb) From Mycobacterium Tuberculosis In Three Crystal Forms.
Acta Crystallogr. , Sect. D V. 66 61 2010
PubMed-ID: 20057050  |  Reference-DOI: 10.1107/S0907444909043960

(-) Compounds

Molecule 1 - DIHYDRODIPICOLINATE REDUCTASE
    ChainsA, B, C, D, E, F, G, H
    EC Number1.3.1.26
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPETM-11
    Expression System StrainBL21(DE3)RP
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneDAPB
    Organism ScientificMYCOBACTERIUM TUBERCULOSIS
    Organism Taxid1773
    SynonymDHPR

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)ABCD    
Biological Unit 2 (1x)    EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 14)

Asymmetric Unit (2, 14)
No.NameCountTypeFull Name
1MG6Ligand/IonMAGNESIUM ION
2NAI8Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2NAI4Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2NAI4Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREVAL D:20 , ALA D:21 , ALA D:23 , LEU D:26 , HOH D:505 , HOH D:585BINDING SITE FOR RESIDUE MG D 401
02AC2SOFTWAREVAL G:20 , ALA G:21 , ALA G:23 , LEU G:26 , HOH G:511BINDING SITE FOR RESIDUE MG G 402
03AC3SOFTWAREVAL E:20 , ALA E:21 , ALA E:23 , LEU E:26BINDING SITE FOR RESIDUE MG E 403
04AC4SOFTWAREVAL B:20 , ALA B:21 , ALA B:23 , LEU B:26 , HOH B:555BINDING SITE FOR RESIDUE MG B 404
05AC5SOFTWAREVAL A:20 , ALA A:21 , ALA A:23 , LEU A:26BINDING SITE FOR RESIDUE MG A 405
06AC6SOFTWAREVAL F:20 , ALA F:21 , ALA F:23 , LEU F:26BINDING SITE FOR RESIDUE MG F 406
07AC7SOFTWAREGLY A:7 , LYS A:9 , GLY A:10 , LYS A:11 , VAL A:12 , LEU A:32 , ASP A:33 , ALA A:34 , PHE A:52 , THR A:53 , VAL A:57 , GLY A:75 , THR A:76 , THR A:77 , ALA A:102 , PRO A:103 , ASN A:104 , PHE A:105 , PHE A:217 , HOH A:503 , HOH A:512BINDING SITE FOR RESIDUE NAI A 501
08AC8SOFTWAREGLY B:7 , LYS B:9 , GLY B:10 , LYS B:11 , VAL B:12 , LEU B:32 , ASP B:33 , ALA B:34 , PHE B:52 , THR B:53 , VAL B:57 , GLY B:75 , THR B:76 , THR B:77 , ALA B:102 , PRO B:103 , ASN B:104 , PHE B:105 , PHE B:217 , HOH B:516BINDING SITE FOR RESIDUE NAI B 502
09AC9SOFTWAREGLY C:7 , LYS C:9 , GLY C:10 , LYS C:11 , VAL C:12 , ASP C:33 , ALA C:34 , PHE C:52 , THR C:53 , VAL C:57 , GLY C:75 , THR C:77 , ALA C:102 , PRO C:103 , ASN C:104 , PHE C:105 , PHE C:217 , HOH C:529BINDING SITE FOR RESIDUE NAI C 503
10BC1SOFTWARESER C:166 , THR C:167 , HOH C:505 , GLY D:7 , LYS D:9 , GLY D:10 , LYS D:11 , VAL D:12 , ASP D:33 , ALA D:34 , PHE D:52 , THR D:53 , VAL D:57 , GLY D:75 , THR D:77 , ALA D:102 , PRO D:103 , ASN D:104 , PHE D:105 , PHE D:217 , HOH D:510 , HOH D:511 , HOH D:524 , HOH D:527 , HOH D:546 , HOH D:580BINDING SITE FOR RESIDUE NAI D 504
11BC2SOFTWAREGLY E:7 , LYS E:9 , GLY E:10 , LYS E:11 , VAL E:12 , ASP E:33 , ALA E:34 , PHE E:52 , THR E:53 , VAL E:57 , GLY E:75 , THR E:76 , THR E:77 , ALA E:102 , PRO E:103 , ASN E:104 , PHE E:105 , PHE E:217 , HOH E:507BINDING SITE FOR RESIDUE NAI E 505
12BC3SOFTWARELEU F:6 , GLY F:7 , GLY F:10 , LYS F:11 , VAL F:12 , ASP F:33 , ALA F:34 , PHE F:52 , THR F:53 , VAL F:57 , GLY F:75 , THR F:76 , THR F:77 , ALA F:102 , PRO F:103 , ASN F:104 , PHE F:105 , HOH F:513BINDING SITE FOR RESIDUE NAI F 506
13BC4SOFTWARELEU G:6 , GLY G:7 , LYS G:9 , GLY G:10 , LYS G:11 , VAL G:12 , LEU G:32 , ASP G:33 , ALA G:34 , PHE G:52 , THR G:53 , GLY G:75 , THR G:76 , THR G:77 , ALA G:102 , PRO G:103 , ASN G:104 , PHE G:105 , PHE G:217 , HOH G:508 , HOH G:524 , HOH G:563BINDING SITE FOR RESIDUE NAI G 507
14BC5SOFTWAREGLY H:7 , LYS H:9 , GLY H:10 , LYS H:11 , VAL H:12 , ASP H:33 , ALA H:34 , PHE H:52 , THR H:53 , VAL H:57 , GLY H:75 , THR H:77 , ALA H:102 , PRO H:103 , ASN H:104 , PHE H:105 , PHE H:217 , HOH H:515BINDING SITE FOR RESIDUE NAI H 508

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1YL7)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Ala A:139 -Pro A:140
2Ala B:139 -Pro B:140
3Ala C:139 -Pro C:140
4Ala D:139 -Pro D:140
5Ala E:139 -Pro E:140
6Ala F:139 -Pro F:140
7Ala G:139 -Pro G:140
8Ala H:139 -Pro H:140

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1YL7)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DAPBPS01298 Dihydrodipicolinate reductase signature.DAPB_MYCTO127-144
 
 
 
 
 
 
 
  8A:127-144
B:127-144
C:127-144
D:127-144
E:127-144
F:127-144
G:127-144
H:127-144
DAPB_MYCTU127-144
 
 
 
 
 
 
 
  8A:127-144
B:127-144
C:127-144
D:127-144
E:127-144
F:127-144
G:127-144
H:127-144
Biological Unit 1 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DAPBPS01298 Dihydrodipicolinate reductase signature.DAPB_MYCTO127-144
 
 
 
 
 
 
 
  4A:127-144
B:127-144
C:127-144
D:127-144
-
-
-
-
DAPB_MYCTU127-144
 
 
 
 
 
 
 
  4A:127-144
B:127-144
C:127-144
D:127-144
-
-
-
-
Biological Unit 2 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DAPBPS01298 Dihydrodipicolinate reductase signature.DAPB_MYCTO127-144
 
 
 
 
 
 
 
  4-
-
-
-
E:127-144
F:127-144
G:127-144
H:127-144
DAPB_MYCTU127-144
 
 
 
 
 
 
 
  4-
-
-
-
E:127-144
F:127-144
G:127-144
H:127-144

(-) Exons   (0, 0)

(no "Exon" information available for 1YL7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7a1 A:2-105,A:215-245 Dihydrodipicolinate reductase                                                 d1yl7a2 A:106-214 Dihydrodipicolinate reductase                                                              d1yl7a1 A:2-105,A:215-245       SCOP domains
               CATH domains 1yl7A01 A:1-105,A:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7A02 A:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7A01 A:1-105,A:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhh....eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhh....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 A   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain A from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7a1 A:2-105,A:215-245 Dihydrodipicolinate reductase                                                 d1yl7a2 A:106-214 Dihydrodipicolinate reductase                                                              d1yl7a1 A:2-105,A:215-245       SCOP domains
               CATH domains 1yl7A01 A:1-105,A:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7A02 A:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7A01 A:1-105,A:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhh....eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhh....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 A   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain B from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7b1 B:2-105,B:215-245 Dihydrodipicolinate reductase                                                 d1yl7b2 B:106-214 Dihydrodipicolinate reductase                                                              d1yl7b1 B:2-105,B:215-245       SCOP domains
               CATH domains 1yl7B01 B:1-105,B:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7B02 B:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7B01 B:1-105,B:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 B   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain B from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7b1 B:2-105,B:215-245 Dihydrodipicolinate reductase                                                 d1yl7b2 B:106-214 Dihydrodipicolinate reductase                                                              d1yl7b1 B:2-105,B:215-245       SCOP domains
               CATH domains 1yl7B01 B:1-105,B:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7B02 B:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7B01 B:1-105,B:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 B   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain C from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7c1 C:2-105,C:215-245 Dihydrodipicolinate reductase                                                 d1yl7c2 C:106-214 Dihydrodipicolinate reductase                                                              d1yl7c1 C:2-105,C:215-245       SCOP domains
               CATH domains 1yl7C01 C:1-105,C:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7C02 C:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7C01 C:1-105,C:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhh....eeeeee.....hhhhhh....eeee..hhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.....hhhhhhhhhhh.....eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 C   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain C from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7c1 C:2-105,C:215-245 Dihydrodipicolinate reductase                                                 d1yl7c2 C:106-214 Dihydrodipicolinate reductase                                                              d1yl7c1 C:2-105,C:215-245       SCOP domains
               CATH domains 1yl7C01 C:1-105,C:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7C02 C:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7C01 C:1-105,C:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhh....eeeeee.....hhhhhh....eeee..hhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.....hhhhhhhhhhh.....eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 C   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain D from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7d1 D:2-105,D:215-245 Dihydrodipicolinate reductase                                                 d1yl7d2 D:106-214 Dihydrodipicolinate reductase                                                              d1yl7d1 D:2-105,D:215-245       SCOP domains
               CATH domains 1yl7D01 D:1-105,D:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7D02 D:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7D01 D:1-105,D:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhh.....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 D   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain D from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7d1 D:2-105,D:215-245 Dihydrodipicolinate reductase                                                 d1yl7d2 D:106-214 Dihydrodipicolinate reductase                                                              d1yl7d1 D:2-105,D:215-245       SCOP domains
               CATH domains 1yl7D01 D:1-105,D:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7D02 D:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7D01 D:1-105,D:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee.....hhhhhhhhhhhh..eeee.....hhhhhhhhhhhhh.....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 D   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain E from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7e1 E:2-105,E:215-245 Dihydrodipicolinate reductase                                                 d1yl7e2 E:106-214 Dihydrodipicolinate reductase                                                              d1yl7e1 E:2-105,E:215-245       SCOP domains
               CATH domains 1yl7E01 E:1-105,E:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7E02 E:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7E01 E:1-105,E:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhh.....eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 E   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain E from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7e1 E:2-105,E:215-245 Dihydrodipicolinate reductase                                                 d1yl7e2 E:106-214 Dihydrodipicolinate reductase                                                              d1yl7e1 E:2-105,E:215-245       SCOP domains
               CATH domains 1yl7E01 E:1-105,E:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7E02 E:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7E01 E:1-105,E:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhh.....eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 E   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain F from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7f1 F:2-105,F:215-245 Dihydrodipicolinate reductase                                                 d1yl7f2 F:106-214 Dihydrodipicolinate reductase                                                              d1yl7f1 F:2-105,F:215-245       SCOP domains
               CATH domains 1yl7F01 F:1-105,F:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7F02 F:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7F01 F:1-105,F:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 F   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain F from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7f1 F:2-105,F:215-245 Dihydrodipicolinate reductase                                                 d1yl7f2 F:106-214 Dihydrodipicolinate reductase                                                              d1yl7f1 F:2-105,F:215-245       SCOP domains
               CATH domains 1yl7F01 F:1-105,F:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7F02 F:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7F01 F:1-105,F:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 F   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain G from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7g1 G:2-105,G:215-245 Dihydrodipicolinate reductase                                                 d1yl7g2 G:106-214 Dihydrodipicolinate reductase                                                              d1yl7g1 G:2-105,G:215-245       SCOP domains
               CATH domains 1yl7G01 G:1-105,G:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7G02 G:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7G01 G:1-105,G:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhh....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 G   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain G from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7g1 G:2-105,G:215-245 Dihydrodipicolinate reductase                                                 d1yl7g2 G:106-214 Dihydrodipicolinate reductase                                                              d1yl7g1 G:2-105,G:215-245       SCOP domains
               CATH domains 1yl7G01 G:1-105,G:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7G02 G:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7G01 G:1-105,G:213-245         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeeee.....hhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhh....eeee....hhhhhhhhhhhhhhhhhh.eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 G   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain H from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTO | P9WP22 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTO     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7h1 H:2-105,H:215-245 Dihydrodipicolinate reductase                                                 d1yl7h2 H:106-214 Dihydrodipicolinate reductase                                                              d1yl7h1 H:2-105,H:215-245       SCOP domains
               CATH domains 1yl7H01 H:1-105,H:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7H02 H:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7H01 H:1-105,H:213-245         CATH domains
           Pfam domains (1) -DapB_N-1yl7H01 H:2-105                                                                                  --DapB_C-1yl7H09 H:108-242                                                                                                               --- Pfam domains (1)
           Pfam domains (2) -DapB_N-1yl7H02 H:2-105                                                                                  --DapB_C-1yl7H10 H:108-242                                                                                                               --- Pfam domains (2)
           Pfam domains (3) -DapB_N-1yl7H03 H:2-105                                                                                  --DapB_C-1yl7H11 H:108-242                                                                                                               --- Pfam domains (3)
           Pfam domains (4) -DapB_N-1yl7H04 H:2-105                                                                                  --DapB_C-1yl7H12 H:108-242                                                                                                               --- Pfam domains (4)
           Pfam domains (5) -DapB_N-1yl7H05 H:2-105                                                                                  --DapB_C-1yl7H13 H:108-242                                                                                                               --- Pfam domains (5)
           Pfam domains (6) -DapB_N-1yl7H06 H:2-105                                                                                  --DapB_C-1yl7H14 H:108-242                                                                                                               --- Pfam domains (6)
           Pfam domains (7) -DapB_N-1yl7H07 H:2-105                                                                                  --DapB_C-1yl7H15 H:108-242                                                                                                               --- Pfam domains (7)
           Pfam domains (8) -DapB_N-1yl7H08 H:2-105                                                                                  --DapB_C-1yl7H16 H:108-242                                                                                                               --- Pfam domains (8)
         Sec.struct. author .eeeee...hhhhhhhhhhhhh....eeeeee......hhhhhh...eeee..hhhhhhhhhhhhhhhh.eeee.......hhhhhhhhhh......eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 H   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

Chain H from PDB  Type:PROTEIN  Length:245
 aligned with DAPB_MYCTU | P9WP23 from UniProtKB/Swiss-Prot  Length:245

    Alignment length:245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
           DAPB_MYCTU     1 MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
               SCOP domains -d1yl7h1 H:2-105,H:215-245 Dihydrodipicolinate reductase                                                 d1yl7h2 H:106-214 Dihydrodipicolinate reductase                                                              d1yl7h1 H:2-105,H:215-245       SCOP domains
               CATH domains 1yl7H01 H:1-105,H:213-245 NAD(P)-binding Rossmann-like Domain                                            1yl7H02 H:106-212 Dihydrodipicolinate Reductase; domain 2                                                  1yl7H01 H:1-105,H:213-245         CATH domains
           Pfam domains (1) -DapB_N-1yl7H01 H:2-105                                                                                  --DapB_C-1yl7H09 H:108-242                                                                                                               --- Pfam domains (1)
           Pfam domains (2) -DapB_N-1yl7H02 H:2-105                                                                                  --DapB_C-1yl7H10 H:108-242                                                                                                               --- Pfam domains (2)
           Pfam domains (3) -DapB_N-1yl7H03 H:2-105                                                                                  --DapB_C-1yl7H11 H:108-242                                                                                                               --- Pfam domains (3)
           Pfam domains (4) -DapB_N-1yl7H04 H:2-105                                                                                  --DapB_C-1yl7H12 H:108-242                                                                                                               --- Pfam domains (4)
           Pfam domains (5) -DapB_N-1yl7H05 H:2-105                                                                                  --DapB_C-1yl7H13 H:108-242                                                                                                               --- Pfam domains (5)
           Pfam domains (6) -DapB_N-1yl7H06 H:2-105                                                                                  --DapB_C-1yl7H14 H:108-242                                                                                                               --- Pfam domains (6)
           Pfam domains (7) -DapB_N-1yl7H07 H:2-105                                                                                  --DapB_C-1yl7H15 H:108-242                                                                                                               --- Pfam domains (7)
           Pfam domains (8) -DapB_N-1yl7H08 H:2-105                                                                                  --DapB_C-1yl7H16 H:108-242                                                                                                               --- Pfam domains (8)
         Sec.struct. author .eeeee...hhhhhhhhhhhhh....eeeeee......hhhhhh...eeee..hhhhhhhhhhhhhhhh.eeee.......hhhhhhhhhh......eeee....hhhhhhhhhhhhhhhh...eeeeeeee.....ee.hhhhhhhhhhhhhhh...........ee......eee..eeeeeee.....eeeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhhhh.eeee.hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------DAPB              ----------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yl7 H   1 ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH 245
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 16)

Asymmetric Unit
2ad1yl7a1A:2-105,A:215-245
2bd1yl7g1G:2-105,G:215-245
2cd1yl7h1H:2-105,H:215-245
2dd1yl7b1B:2-105,B:215-245
2ed1yl7c1C:2-105,C:215-245
2fd1yl7d1D:2-105,D:215-245
2gd1yl7e1E:2-105,E:215-245
2hd1yl7f1F:2-105,F:215-245

(-) CATH Domains  (2, 16)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
2a1yl7A01A:1-105,A:213-245
2b1yl7B01B:1-105,B:213-245
2c1yl7C01C:1-105,C:213-245
2d1yl7D01D:1-105,D:213-245
2e1yl7E01E:1-105,E:213-245
2f1yl7F01F:1-105,F:213-245
2g1yl7G01G:1-105,G:213-245
2h1yl7H01H:1-105,H:213-245

(-) Pfam Domains  (2, 16)

Asymmetric Unit
2aDapB_C-1yl7H09H:108-242
2bDapB_C-1yl7H10H:108-242
2cDapB_C-1yl7H11H:108-242
2dDapB_C-1yl7H12H:108-242
2eDapB_C-1yl7H13H:108-242
2fDapB_C-1yl7H14H:108-242
2gDapB_C-1yl7H15H:108-242
2hDapB_C-1yl7H16H:108-242

(-) Gene Ontology  (16, 27)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (DAPB_MYCTO | P9WP22)
molecular function
    GO:0008839    4-hydroxy-tetrahydrodipicolinate reductase    Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016726    oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0019877    diaminopimelate biosynthetic process    The chemical reactions and pathways resulting in the formation of diaminopimelate, both as an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.
    GO:0009085    lysine biosynthetic process    The chemical reactions and pathways resulting in the formation of lysine, 2,6-diaminohexanoic acid.
    GO:0009089    lysine biosynthetic process via diaminopimelate    The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D,E,F,G,H   (DAPB_MYCTU | P9WP23)
molecular function
    GO:0008839    4-hydroxy-tetrahydrodipicolinate reductase    Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0070404    NADH binding    Interacting selectively and non-covalently with the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0070402    NADPH binding    Interacting selectively and non-covalently with the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016726    oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0019877    diaminopimelate biosynthetic process    The chemical reactions and pathways resulting in the formation of diaminopimelate, both as an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.
    GO:0009085    lysine biosynthetic process    The chemical reactions and pathways resulting in the formation of lysine, 2,6-diaminohexanoic acid.
    GO:0009089    lysine biosynthetic process via diaminopimelate    The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DAPB_MYCTO | P9WP221c3v 1p9l 1yl5 1yl6
        DAPB_MYCTU | P9WP231c3v 1p9l 1yl5 1yl6

(-) Related Entries Specified in the PDB File

1yl5 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDRODIPICOLINATE REDUCTASE (RV2773C) (CRYSTAL FORM A)
1yl6 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDRODIPICOLINATE REDUCTASE (RV2773C) (CRYSTAL FORM B) RELATED ID: RV2773C RELATED DB: TARGETDB