Chain A from PDB Type:PROTEIN Length:210
aligned with SODM_DEIRA | Q9RUV2 from UniProtKB/Swiss-Prot Length:211
Alignment length:213
211
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210|
SODM_DEIRA 1 MAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK-- -
SCOP domains -d1y67a1 A:2-89 Mn superoxide dismutase (MnSOD) --------d1y67a2 A:98-213 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...................hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh......---....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeee...hhhhhhhhhh...eeeeeee.hhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN --------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y67 A 1 AAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQG---ANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAKLV 213
10 20 30 40 50 60 70 80 90 | |100 110 120 130 140 150 160 170 180 190 200 210
93 97
Chain B from PDB Type:PROTEIN Length:204
aligned with SODM_DEIRA | Q9RUV2 from UniProtKB/Swiss-Prot Length:211
Alignment length:211
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
SODM_DEIRA 1 MAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 211
SCOP domains -d1y67b1 B:2-89 Mn superoxide dismutase (MnSOD) --------d1y67b2 B:98-211 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...................hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.........hhhhhhhhhhhhhhhhhhhhh...-------...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........................hhhhhhhhhh...........hhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN ------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y67 B 1 AAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQ-------NQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 211
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
90 98
Chain C from PDB Type:PROTEIN Length:204
aligned with SODM_DEIRA | Q9RUV2 from UniProtKB/Swiss-Prot Length:211
Alignment length:212
211
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
SODM_DEIRA 2 AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK-- -
SCOP domains d1y67c1 C:2-89 Mn superoxide dismutase (MnSOD) --------d1y67c2 C:98-213 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh..--------...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........................hhhhhhhhhh...........hhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN --------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y67 C 2 AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMG--------NQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAKLV 213
11 21 31 41 51 61 71 81 | - |101 111 121 131 141 151 161 171 181 191 201 211
89 98
Chain D from PDB Type:PROTEIN Length:214
aligned with SODM_DEIRA | Q9RUV2 from UniProtKB/Swiss-Prot Length:211
Alignment length:214
211
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
SODM_DEIRA 2 AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK---- -
SCOP domains d1y67d1 D:2-89 Mn superoxide dismutase (MnSOD) --------d1y67d2 D:98-213 Mn superoxide dismutase (MnSOD) -- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Sod_Fe_N-1y67D05 D:2-89 --------Sod_Fe_C-1y67D01 D:98-207 -------- Pfam domains (1)
Pfam domains (2) Sod_Fe_N-1y67D06 D:2-89 --------Sod_Fe_C-1y67D02 D:98-207 -------- Pfam domains (2)
Pfam domains (3) Sod_Fe_N-1y67D07 D:2-89 --------Sod_Fe_C-1y67D03 D:98-207 -------- Pfam domains (3)
Pfam domains (4) Sod_Fe_N-1y67D08 D:2-89 --------Sod_Fe_C-1y67D04 D:98-207 -------- Pfam domains (4)
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........................hhhhhhhhhh...........hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN ----------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y67 D 2 AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAKLVPR 215
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Legend: |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |