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(-) Description

Title :  STRUCTURAL BASIS FOR PHOSPHATIDYLINOSITOL PHOSPHATE KINASE TYPE I-GAMMA BINDING TO TALIN AT FOCAL ADHESIONS
 
Authors :  J. M. De Pereda, K. Wegener, E. Santelli, N. Bate, M. H. Ginsberg, D. R. C I. D. Campbell, R. C. Liddington
Date :  17 Nov 04  (Deposition) - 04 Jan 05  (Release) - 30 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Biol. Unit 6:  K,L  (1x)
Keywords :  Focal Adhesion; Ferm Domain; Cytoskeleton; Npxy Motif; Ptb Domain, Structural Protein, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. M. De Pereda, K. Wegener, E. Santelli, N. Bate, M. H. Ginsberg, D. R. Critchley, I. D. Campbell, R. C. Liddington
Structural Bases For Phosphatidylinositol Phosphate Kinase Type I-Gamma Binding To Talin At Focal Adhesions
J. Biol. Chem. V. 280 8381 2005
PubMed-ID: 15623515  |  Reference-DOI: 10.1074/JBC.M413180200

(-) Compounds

Molecule 1 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE, TYPE 1 GAMMA
    ChainsA, C, E, G, I, K
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET15B
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentC-TERMINAL REGION
    Organism CommonHOUSE MOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    Other DetailsCHIMERA OF CHAIN A/B, C/D, E/F, G/H, I/J, K/L
    Other Details - SourceFORMS CHIMERA WITH TALIN AT THE N-TERMINUS
 
Molecule 2 - TALIN 1
    ChainsB, D, F, H, J, L
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET15B
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentF2 AND F3 SUBDOMAINS OF THE FERM DOMAIN
    GeneTLN1, TLN
    Organism CommonHOUSE MOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    Other DetailsCHIMERA OF CHAIN A/B, C/D, E/F, G/H, I/J, K/L
    Other Details - SourceFORMS CHIMERA WITH PHOSPHATIDYL INOSITOL KINASE TYPE 1 GAMMA AT THE C-TERMINUS

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit ABCDEFGHIJKL
Biological Unit 1 (1x)AB          
Biological Unit 2 (1x)  CD        
Biological Unit 3 (1x)    EF      
Biological Unit 4 (1x)      GH    
Biological Unit 5 (1x)        IJ  
Biological Unit 6 (1x)          KL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1Y19)

(-) Sites  (0, 0)

(no "Site" information available for 1Y19)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1Y19)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1Y19)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1Y19)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  6B:283-312
D:283-312
F:283-312
H:283-312
J:283-312
L:283-312
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1B:283-312
-
-
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1-
D:283-312
-
-
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1-
-
F:283-312
-
-
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1-
-
-
H:283-312
-
-
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1-
-
-
-
J:283-312
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERM_2PS00661 FERM domain signature 2.TLN1_MOUSE283-312
 
 
 
 
 
  1-
-
-
-
-
L:283-312

(-) Exons   (0, 0)

(no "Exon" information available for 1Y19)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .eee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 A 641 SWVYSPLHYSA 651
                                   650 

Chain B from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19b1 B:209-308 Talin-1                                                                           d1y19b2 B:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19B01 B:209-306  [code=1.20.80.10, no name defined]                                             -1y19B02 B:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh......eeeeeee........eeeeeee...eeeee......eeeeee.hhh.eeeee..eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: B:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 B 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

Chain C from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .eee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 C 641 SWVYSPLHYSA 651
                                   650 

Chain D from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19d1 D:209-308 Talin-1                                                                           d1y19d2 D:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19D01 D:209-306  [code=1.20.80.10, no name defined]                                             -1y19D02 D:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....eeeeeeee......eeeeeeeee..eeeeee.....eeeeee.hhh.eeeee..eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: D:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 D 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

Chain E from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author ..ee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 E 641 SWVYSPLHYSA 651
                                   650 

Chain F from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19f1 F:209-308 Talin-1                                                                           d1y19f2 F:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19F01 F:209-306  [code=1.20.80.10, no name defined]                                             -1y19F02 F:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....eeeeeee........eeeeeeee..eeeeee.....eeeeee.hhh.eeeee..eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: F:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 F 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

Chain G from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .eee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 G 641 SWVYSPLHYSA 651
                                   650 

Chain H from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19h1 H:209-308 Talin-1                                                                           d1y19h2 H:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19H01 H:209-306  [code=1.20.80.10, no name defined]                                             -1y19H02 H:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh......eeeeeee........eeeeeee...eeeee......eeeeee.hhh.eeeee..eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: H:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 H 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

Chain I from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author ..ee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 I 641 SWVYSPLHYSA 651
                                   650 

Chain J from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19j1 J:209-308 Talin-1                                                                           d1y19j2 J:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19J01 J:209-306  [code=1.20.80.10, no name defined]                                             -1y19J02 J:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....eeeeeee........eeeeeee...eeeeee.....eeeeee.hhh.eeeee..eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: J:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 J 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

Chain K from PDB  Type:PROTEIN  Length:11
 aligned with PI51C_MOUSE | O70161 from UniProtKB/Swiss-Prot  Length:661

    Alignment length:11
                                   650 
          PI51C_MOUSE   641 SWVYSPLHYSA 651
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author ..ee.hhhh.. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 1y19 K 641 SWVYSPLHYSA 651
                                   650 

Chain L from PDB  Type:PROTEIN  Length:192
 aligned with TLN1_MOUSE | P26039 from UniProtKB/Swiss-Prot  Length:2541

    Alignment length:192
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  
           TLN1_MOUSE   209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
               SCOP domains d1y19l1 L:209-308 Talin-1                                                                           d1y19l2 L:309-400 Talin-1                                                                    SCOP domains
               CATH domains 1y19L01 L:209-306  [code=1.20.80.10, no name defined]                                             -1y19L02 L:308-400 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) CATH domains
           Pfam domains (1) FERM_M-1y19L01 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) FERM_M-1y19L02 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) FERM_M-1y19L03 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) FERM_M-1y19L04 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) FERM_M-1y19L05 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) FERM_M-1y19L06 L:209-313                                                                                 --------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------------------------------------IRS-1y19L07 L:310-400                                                                       Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------------------------------------IRS-1y19L08 L:310-400                                                                       Pfam domains (8)
           Pfam domains (9) -----------------------------------------------------------------------------------------------------IRS-1y19L09 L:310-400                                                                       Pfam domains (9)
          Pfam domains (10) -----------------------------------------------------------------------------------------------------IRS-1y19L10 L:310-400                                                                       Pfam domains (10)
          Pfam domains (11) -----------------------------------------------------------------------------------------------------IRS-1y19L11 L:310-400                                                                       Pfam domains (11)
          Pfam domains (12) -----------------------------------------------------------------------------------------------------IRS-1y19L12 L:310-400                                                                       Pfam domains (12)
         Sec.struct. author hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh............hhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....eeeeeee........eeeeeee...eeeee......eeeeee.hhh.eee....eeeee........eeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------FERM_2  PDB: L:283-312        ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1y19 L 209 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 400
                                   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Family: FERM_M (14)
1aFERM_M-1y19L01L:209-313
1bFERM_M-1y19L02L:209-313
1cFERM_M-1y19L03L:209-313
1dFERM_M-1y19L04L:209-313
1eFERM_M-1y19L05L:209-313
1fFERM_M-1y19L06L:209-313
(-)
Family: IRS (14)
2aIRS-1y19L07L:310-400
2bIRS-1y19L08L:310-400
2cIRS-1y19L09L:310-400
2dIRS-1y19L10L:310-400
2eIRS-1y19L11L:310-400
2fIRS-1y19L12L:310-400

(-) Gene Ontology  (46, 57)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I,K   (PI51C_MOUSE | O70161)
molecular function
    GO:0016308    1-phosphatidylinositol-4-phosphate 5-kinase activity    Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ADP + 2 H(+).
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016307    phosphatidylinositol phosphate kinase activity    Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:1990147    talin binding    Interacting selectively and non-covalently with a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0007409    axonogenesis    De novo generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells. Refers to the morphogenesis or creation of shape or form of the developing axon.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0006935    chemotaxis    The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
    GO:0007016    cytoskeletal anchoring at plasma membrane    A cytoskeleton organization process that directly or indirectly links cytoskeletal filaments to the plasma membrane.
    GO:0006897    endocytosis    A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
    GO:0006887    exocytosis    A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
    GO:0006909    phagocytosis    An endocytosis process that results in the engulfment of external particulate material by phagocytes. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.
    GO:0006661    phosphatidylinositol biosynthetic process    The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
    GO:0046488    phosphatidylinositol metabolic process    The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
    GO:0046854    phosphatidylinositol phosphorylation    The process of introducing one or more phosphate groups into a phosphatidylinositol, any glycerophosphoinositol having one phosphatidyl group esterified to one of the hydroxy groups of inositol.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0070527    platelet aggregation    The adhesion of one platelet to one or more other platelets via adhesion molecules.
cellular component
    GO:0005912    adherens junction    A cell junction at which anchoring proteins (cadherins or integrins) extend through the plasma membrane and are attached to actin filaments.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0012505    endomembrane system    A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0001891    phagocytic cup    An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0032587    ruffle membrane    The portion of the plasma membrane surrounding a ruffle.
    GO:0001931    uropod    A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.

Chain B,D,F,H,J,L   (TLN1_MOUSE | P26039)
molecular function
    GO:0030274    LIM domain binding    Interacting selectively and non-covalently with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions.
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0051015    actin filament binding    Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
    GO:0005178    integrin binding    Interacting selectively and non-covalently with an integrin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005200    structural constituent of cytoskeleton    The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
    GO:0017166    vinculin binding    Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0007044    cell-substrate junction assembly    The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.
    GO:0030866    cortical actin cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
    GO:0007016    cytoskeletal anchoring at plasma membrane    A cytoskeleton organization process that directly or indirectly links cytoskeletal filaments to the plasma membrane.
    GO:0070527    platelet aggregation    The adhesion of one platelet to one or more other platelets via adhesion molecules.
cellular component
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005815    microtubule organizing center    An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0001726    ruffle    Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.
    GO:0032587    ruffle membrane    The portion of the plasma membrane surrounding a ruffle.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PI51C_MOUSE | O701612h7d 2h7e
        TLN1_MOUSE | P260391sj7 1sj8 1t01 1u89 1xwx 1zw3 2b0h 2g35 2jsw 2kbb 2kc1 2kc2 2kgx 2kma 2kvp 2l10 2l7a 2l7n 2lqg 2qdq 2x0c 3dyj 3ivf 3s90 4f7g 4w8p 5fzt 5ic0 5ic1

(-) Related Entries Specified in the PDB File

1mix EQUIVALENT REGION OF CHICKEN TALIN
1miz EQUIVALENT REGION OF CHICKEN TALIN BOUND TO THE CYTOPLASMIC REGION OF INTEGRIN BETA3
1mk7 EQUIVALENT REGION OF CHICKEN TALIN BOUND TO THE CYTOPLASMIC REGION OF INTEGRIN BETA3
1mk9 EQUIVALENT REGION OF CHICKEN TALIN BOUND TO THE CYTOPLASMIC REGION OF INTEGRIN BETA3