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(-) Description

Title :  STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION PA3463 FROM PSEUDOMONAS AERUGINOSA PAO1
 
Authors :  T. A. Binkowski, A. Edwards, A. Savchenko, T. Skarina, E. Gorodichtche A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  15 Nov 04  (Deposition) - 21 Dec 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Mcsg, Midwest Center For Structural Genomics, Protein Structure Initiative, Psi, Structural Genomics, Pseudomonsa Aeruginosa, Hypothetical Protein, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. A. Binkowski, A. Edwards, A. Savchenko, T. Skarina, E. Gorodichtchenskaia, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Hypothetical Protein Pa3463 From Pseudomonas Aeruginosa Strain Pao1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL UPF0270 PROTEIN PA3463
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PA3463
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:3 , PRO A:4 , HIS A:5 , VAL A:51 , ILE A:52 , HOH A:109BINDING SITE FOR RESIDUE GOL A 101
2AC2SOFTWAREGLU A:49 , SER A:67 , GOL A:102 , HOH A:116 , HOH A:118BINDING SITE FOR RESIDUE GOL A 104
3AC3SOFTWAREGLU A:49 , ARG A:66 , SER A:67 , GOL A:104 , HOH A:106BINDING SITE FOR RESIDUE GOL A 102
4AC4SOFTWAREHIS A:43 , ARG A:47 , PRO A:70 , ALA A:71 , HOH A:131 , HOH A:132BINDING SITE FOR RESIDUE GOL A 103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1Y0N)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:-1 -His A:0

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1Y0N)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1Y0N)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:71
 aligned with Y3463_PSEAE | Q9HYE3 from UniProtKB/Swiss-Prot  Length:76

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
           Y3463_PSEAE    - --MLIPHDLLEADTLNNLLEDFVTREGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD 76
               SCOP domains d1y0na_ A: Hypothetical U       PF0270 protein PA3463                          SCOP domains
               CATH domains 1y0nA00 A:-1-76 Hypotheti       cal upf0270 protein pa3463                     CATH domains
               Pfam domains --UPF0270-1y0nA01 A:1-69                                               ------- Pfam domains
         Sec.struct. author ..ee.hhhhhhhhhhhhhhhhhhhh-------..hhhhhhhhhhhhhhh..eeeee......eeeee.hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1y0n A -1 GHMLIPHDLLEADTLNNLLEDFVTR-------ETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD 76
                                     8        18    |    -  |     38        48        58        68        
                                                   23      31
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: UPF0270] (1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1Y0N)

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  1y0n
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  Y3463_PSEAE | Q9HYE3
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