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(-) Description

Title :  CD3 EPSILON AND DELTA ECTODOMAIN FRAGMENT COMPLEX IN SINGLE-CHAIN CONSTRUCT
 
Authors :  Z. -Y. J. Sun, S. T. Kim, I. C. Kim, A. Fahmy, E. L. Reinherz, G. Wagner
Date :  04 Oct 04  (Deposition) - 30 Nov 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (15x)
Keywords :  Beta-Sheet, C1-Set Immunoglobulin Superfamily, H-Bonded G Strand Pair, Single-Chain, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Z. Y. Sun, S. T. Kim, I. C. Kim, A. Fahmy, E. L. Reinherz, G. Wagner
Solution Structure Of The Cd3Epsilondelta Ectodomain And Comparison With Cd3Epsilongamma As A Basis For Modeling T Cell Receptor Topology And Signaling.
Proc. Natl. Acad. Sci. Usa V. 101 16867 2004
PubMed-ID: 15557001  |  Reference-DOI: 10.1073/PNAS.0407576101
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CHIMERIC CD3 MOUSE EPSILON AND SHEEP DELTA ECTODOMAIN FRAGMENT COMPLEX
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET-11A
    Expression System StrainB834(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCD3E, CD3D
    Organism CommonHOUSE MOUSE, SHEEP
    Organism ScientificMUS MUSCULUS, OVIS ARIES
    Organism Taxid10090,9940
    Strain,

 Structural Features

(-) Chains, Units

  
NMR Structure (15x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1XMW)

(-) Sites  (0, 0)

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(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:21 -A:62
2A:127 -A:163

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                  
               SCOP domains d1xmwa1 A:1-79 CD3 epsilon chain ectodomain fragment                           ---------------------------------d1xmwa2 A:113-178 CD3 epsilon chain ectodomain fragment            SCOP domains
               CATH domains 1xmwA01 A:1-79 Immunoglobulins                                                 ----------------------------------1xmwA02 A:114-178 Immunoglobulins                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..eeeee.........eeee...........eeee...hhhhhheeeeee.......eeeeee......................................eeeee..eeeee.....eeeee.....................eeeee........eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xmw A   1 DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKRALEVLEAEDKVILKCNSSITLLQGTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQVYYRM 178
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170        

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

NMR Structure

(-) CATH Domains  (1, 2)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1XMW)

(-) Gene Ontology  (35, 40)

NMR Structure(hide GO term definitions)

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 Related Entries

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UniProtKB/Swiss-Prot
        CD3E_MOUSE | P226461jbj 2k4f 3r08

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