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(-) Description

Title :  CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN ST2180 FROM SULFOLOBUS TOKODAII
 
Authors :  T. Sasaki, Y. Tanaka, Y. Yasutake, K. Tsumoto, I. Tanaka, I. Kumagai
Date :  27 Dec 04  (Deposition) - 03 Jan 06  (Release) - 01 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Tanaka, T. Sasaki, I. Kumagai, Y. Yasutake, M. Yao, I. Tanaka, K. Tsumoto
Molecular Properties Of Two Proteins Homologous To Pduo-Typ Atp:Cob(I)Alamin Adenosyltransferase From Sulfolobus Tokodaii
Proteins V. 68 446 2007
PubMed-ID: 17492665  |  Reference-DOI: 10.1002/PROT.21303

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN ST2180
    ChainsA, B, C
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET20B
    Expression System StrainB834
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneST2180
    Organism ScientificSULFOLOBUS TOKODAII
    Organism Taxid273063
    StrainSTR. 7

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1WVT)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WVT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WVT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WVT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WVT)

(-) Exons   (0, 0)

(no "Exon" information available for 1WVT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:148
 aligned with Q96YJ2_SULTO | Q96YJ2 from UniProtKB/TrEMBL  Length:172

    Alignment length:148
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161        
         Q96YJ2_SULTO    22 KDSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDMNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIWR 169
               SCOP domains d1wvta_ A: automated matches                                                                                                                         SCOP domains
               CATH domains 1wvtA00 A:22-169  [code=1.20.1200.10, no name defined]                                                                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh........ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh....ee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wvt A  22 KDSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDmNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIWR 169
                                    31        41        51        61        71 |      81        91       101       111       121       131       141       151       161        
                                                                              73-MSE                                                                                            

Chain B from PDB  Type:PROTEIN  Length:147
 aligned with Q96YJ2_SULTO | Q96YJ2 from UniProtKB/TrEMBL  Length:172

    Alignment length:147
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       
         Q96YJ2_SULTO    23 DSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDMNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIWR 169
               SCOP domains d1wvtb_ B: automated matches                                                                                                                        SCOP domains
               CATH domains 1wvtB00 B:23-169  [code=1.20.1200.10, no name defined]                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh........ee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh...ee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wvt B  23 DSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDmNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIWR 169
                                    32        42        52        62        72|       82        92       102       112       122       132       142       152       162       
                                                                             73-MSE                                                                                            

Chain C from PDB  Type:PROTEIN  Length:146
 aligned with Q96YJ2_SULTO | Q96YJ2 from UniProtKB/TrEMBL  Length:172

    Alignment length:146
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162      
         Q96YJ2_SULTO    23 DSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDMNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIW 168
               SCOP domains d1wvtc_ C: automated matches                                                                                                                       SCOP domains
               CATH domains 1wvtC00 C:23-168  [code=1.20.1200.10, no name defined]                                                                                             CATH domains
           Pfam domains (1) Cob_adeno_trans-1wvtC01 C:23-158                                                                                                        ---------- Pfam domains (1)
           Pfam domains (2) Cob_adeno_trans-1wvtC02 C:23-158                                                                                                        ---------- Pfam domains (2)
           Pfam domains (3) Cob_adeno_trans-1wvtC03 C:23-158                                                                                                        ---------- Pfam domains (3)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh........ee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh....ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wvt C  23 DSEIVKALGDLDELNSVLGVVSSLYPELSEVIQKLQNDIFSISSEIAGFDmNFSDEKVKGIEELITNYSKELEPLRNFVLPGGHIASSFLHLARAVCRRAERSVVTLLKESKAKEVHAKYLNRLSSLLFVLALVVNKRTNNPNVIW 168
                                    32        42        52        62        72|       82        92       102       112       122       132       142       152       162      
                                                                             73-MSE                                                                                           

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 3)

Asymmetric/Biological Unit

(-) Pfam Domains  (1, 3)

Asymmetric/Biological Unit

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C   (Q96YJ2_SULTO | Q96YJ2)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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