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(-) Description

Title :  SOLUTION STRUCTURE OF BMP08 FROM THE VENOM OF SCORPION BUTHUS MARTENSII KARSCH, 20 STRUCTURES
 
Authors :  H. Wu, X. Chen, X. Tong, Y. Li, N. Zhang, G. Wu
Date :  17 Nov 04  (Deposition) - 19 Apr 05  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Alpha/Beta Scaffold, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Chen, Y. Li, X. Tong, N. Zhang, G. Wu, Q. Zhang, H. Wu
Solution Structure Of Bmp08, A Novel Short-Chain Scorpion Toxin From Buthus Martensi Karsch.
Biochem. Biophys. Res. Commun. V. 330 1116 2005
PubMed-ID: 15823559  |  Reference-DOI: 10.1016/J.BBRC.2005.03.084
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NEUROTOXIN BMK X
    Chains: A
    Organism Common: CHINESE SCORPION
    Organism Scientific: MESOBUTHUS MARTENSII
    Organism Taxid: 34649
    Secretion: VENOM

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

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(no "Ligand,Modified Residues,Ions" information available for 1WT8)

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(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:7 -A:22
2A:13 -A:27
3A:16 -A:30

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WT8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:31
 aligned with SCKI_MESMA | Q7Z0H4 from UniProtKB/Swiss-Prot  Length:55

    Alignment length:31
                                    33        43        53 
            SCKI_MESMA   24 TPYPVNCKTDRDCVMCGLGISCKNGYCQGCT 54
               SCOP domains d1wt8a_ A: Bmkx                 SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains -BmKX-1wt8A01 A:2-31            Pfam domains
         Sec.struct. author .....ee.hhhhhhhhh.......ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  1wt8 A  1 TPYPVNCKTDRDCVMCGLGISCKNGYCQGCT 31
                                    10        20        30
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Small proteins (3458)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1WT8)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: BmKX] (2)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (SCKI_MESMA | Q7Z0H4)
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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 Related Entries

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UniProtKB/Swiss-Prot
        SCKI_MESMA | Q7Z0H4: 1rji

(-) Related Entries Specified in the PDB File

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