Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF BLASTICIDIN S DEAMINASE (BSD) COMPLEXED WITH CACODYLIC ACID
 
Authors :  T. Kumasaka, M. Yamamoto, M. Furuichi, M. Nakasako, M. Kimura, I. Yamag T. Ueki
Date :  27 Jul 04  (Deposition) - 25 Oct 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Hydrolase, Cytidine Deaminase Family, Tetramer (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Kumasaka, M. Yamamoto, M. Furuichi, M. Nakasako, A. H. Teh, M. Kimura, I. Yamaguchi, T. Ueki
Crystal Structures Of Blasticidin S Deaminase (Bsd): Implications For Dynamic Properties Of Catalytic Zinc
J. Biol. Chem. V. 282 37103 2007
PubMed-ID: 17959604  |  Reference-DOI: 10.1074/JBC.M704476200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BLASTICIDIN-S DEAMINASE
    Chains: A, B, C, D
    EC Number: 3.5.4.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-12A
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: ASPERGILLUS TERREUS
    Organism Taxid: 33178
    Strain: S-712

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric/Biological Unit (2, 8)
No.NameCountTypeFull Name
1CAC4Ligand/IonCACODYLATE ION
2ZN4Ligand/IonZINC ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:54 , CYS A:88 , CYS A:91 , CAC A:2001BINDING SITE FOR RESIDUE ZN A 1001
2AC2SOFTWARECYS B:54 , CYS B:88 , CYS B:91 , CAC B:2002BINDING SITE FOR RESIDUE ZN B 1002
3AC3SOFTWAREVAL A:29 , CYS A:54 , GLU A:56 , LEU A:85 , SER A:86 , PRO A:87 , CYS A:88 , CYS A:91 , ZN A:1001 , HOH A:2043 , TYR B:126BINDING SITE FOR RESIDUE CAC A 2001
4AC4SOFTWARECYS C:54 , CYS C:88 , CYS C:91 , CAC C:2003BINDING SITE FOR RESIDUE ZN C 1003
5AC5SOFTWARECYS D:54 , CYS D:88 , CYS D:91 , CAC D:2004BINDING SITE FOR RESIDUE ZN D 1004
6AC6SOFTWARETYR A:126 , GLU B:56 , LEU B:85 , SER B:86 , PRO B:87 , CYS B:88 , CYS B:91 , ZN B:1002 , HOH B:2018BINDING SITE FOR RESIDUE CAC B 2002
7AC7SOFTWAREGLU C:56 , LEU C:85 , SER C:86 , PRO C:87 , CYS C:88 , CYS C:91 , ZN C:1003 , HOH C:2016 , TYR D:126BINDING SITE FOR RESIDUE CAC C 2003
8AC8SOFTWARETYR C:126 , CYS D:54 , GLU D:56 , SER D:86 , PRO D:87 , CYS D:88 , CYS D:91 , ZN D:1004 , HOH D:2038BINDING SITE FOR RESIDUE CAC D 2004

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WN5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WN5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WN5)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYT_DCMP_DEAMINASES_1PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.BSD_ASPTE54-95
 
 
 		  4A:54-95
B:54-95
C:54-95
D:54-95
BSD_ASPTN54-95
 
 
 		  4A:54-95
B:54-95
C:54-95
D:54-95

(-) Exons   (0, 0)

(no "Exon" information available for 1WN5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTE | P0C2P0 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTE     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5a1 A:2-126 Blasticidin-S deaminase                                                                                       SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeee.hhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: A:54-95       ------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 A   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain A from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTN | P0C2P1 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTN     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAVVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5a1 A:2-126 Blasticidin-S deaminase                                                                                       SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeee.hhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: A:54-95       ------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 A   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain B from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTE | P0C2P0 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTE     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5b_ B: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeeehhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: B:54-95       ------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 B   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain B from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTN | P0C2P1 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTN     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAVVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5b_ B: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeeehhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: B:54-95       ------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 B   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain C from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTE | P0C2P0 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTE     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5c_ C: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeee.hhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: C:54-95       ------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 C   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain C from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTN | P0C2P1 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTN     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAVVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5c_ C: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeee.hhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: C:54-95       ------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 C   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain D from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTE | P0C2P0 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTE     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5d_ D: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --dCMP_cyt_deam_1-1wn5D01 D:4-108                                                                          ------------------ Pfam domains (1)
           Pfam domains (2) --dCMP_cyt_deam_1-1wn5D02 D:4-108                                                                          ------------------ Pfam domains (2)
           Pfam domains (3) --dCMP_cyt_deam_1-1wn5D03 D:4-108                                                                          ------------------ Pfam domains (3)
           Pfam domains (4) --dCMP_cyt_deam_1-1wn5D04 D:4-108                                                                          ------------------ Pfam domains (4)
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeeehhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: D:54-95       ------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 D   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain D from PDB  Type:PROTEIN  Length:125
 aligned with BSD_ASPTN | P0C2P1 from UniProtKB/Swiss-Prot  Length:130

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
            BSD_ASPTN     2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAVVKDSDGQPTAVGIRELLPSGY 126
               SCOP domains d1wn5d_ D: automated matches                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --dCMP_cyt_deam_1-1wn5D01 D:4-108                                                                          ------------------ Pfam domains (1)
           Pfam domains (2) --dCMP_cyt_deam_1-1wn5D02 D:4-108                                                                          ------------------ Pfam domains (2)
           Pfam domains (3) --dCMP_cyt_deam_1-1wn5D03 D:4-108                                                                          ------------------ Pfam domains (3)
           Pfam domains (4) --dCMP_cyt_deam_1-1wn5D04 D:4-108                                                                          ------------------ Pfam domains (4)
         Sec.struct. author ..hhhhhhhhhhhhhhhhh........eeeeeee....eeeee.........hhhhhhhhhhhhh....eeeeeeee....ee...hhhhhhhhhhhh...eeeee.....eeeeehhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------CYT_DCMP_DEAMINASES_1  PDB: D:54-95       ------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wn5 D   2 PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLPSGY 126
                                    11        21        31        41        51        61        71        81        91       101       111       121
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1WN5)

(-) Pfam Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Clan: CDA (39)

(-) Gene Ontology  (6, 12)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (BSD_ASPTE | P0C2P0)
molecular function
    GO:0047711    blasticidin-S deaminase activity    Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

Chain A,B,C,D   (BSD_ASPTN | P0C2P1)
molecular function
    GO:0047711    blasticidin-S deaminase activity    Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CAC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1wn5)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1wn5
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  BSD_ASPTE | P0C2P0
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  BSD_ASPTN | P0C2P1
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.5.4.23
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  BSD_ASPTE | P0C2P0
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  BSD_ASPTN | P0C2P1
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BSD_ASPTE | P0C2P0: 1wn6 2z3g 2z3h 2z3i 2z3j
        BSD_ASPTN | P0C2P1: 1wn6

(-) Related Entries Specified in the PDB File

1af2
1jtk
1wn6 THE SAME PROTEIN COMPLEXED WITH TETRAHEDRAL INTERMEDIATE OF BLASTICIDIN S