Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit - manually
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit - manually
Asym./Biol. Unit - manually  (Jmol Viewer)
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF ALPHA-XYLOSIDASE FROM ESCHERICHIA COLI
 
Authors :  T. Ose, M. Kitamura, M. Okuyama, H. Mori, A. Kimura, N. Watanabe, M. Yao, I. Tanaka
Date :  24 May 04  (Deposition) - 15 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Tim Barrel, Glycoside Hydrolase, Gh Family 31 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Ose, M. Kitamura, M. Okuyama, H. Mori, A. Kimura, N. Watanabe, M. Yao, I. Tanaka
Crystal Structure Of Alpha-Xylosidase From Escherichia Coli
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE FAMILY 31 GLUCOSIDASE YICI
    Chains: A, B, C, D, E, F
    EC Number: 3.2.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PTRC99A
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YICI
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: ALPHA-XYLOSIDASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 120)

Asymmetric/Biological Unit (2, 120)
No.NameCountTypeFull Name
1MES6Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
2MSE114Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:277 , HIS A:304 , ASP A:306 , CYS A:307 , TRP A:345 , TRP A:380 , LYS A:414 , ASP A:416 , ARG A:538BINDING SITE FOR RESIDUE MES A 801
2AC2SOFTWARETHR B:274 , HIS B:304 , ASP B:306 , TRP B:345 , LYS B:414 , ASP B:416 , ARG B:538BINDING SITE FOR RESIDUE MES B 802
3AC3SOFTWAREPHE C:277 , HIS C:304 , ASP C:306 , TRP C:345 , TRP C:380 , LYS C:414 , ASP C:416 , ARG C:538BINDING SITE FOR RESIDUE MES C 803
4AC4SOFTWARETHR D:274 , HIS D:304 , ASP D:306 , TRP D:345 , TRP D:380 , LYS D:414 , ASP D:416 , PHE D:417 , ARG D:538BINDING SITE FOR RESIDUE MES D 804
5AC5SOFTWAREHIS E:304 , ASP E:306 , TRP E:345 , TRP E:380 , LYS E:414 , ASP E:416 , ARG E:538BINDING SITE FOR RESIDUE MES E 805
6AC6SOFTWAREPHE F:277 , HIS F:304 , ASP F:306 , CYS F:307 , TRP F:345 , TRP F:380 , LYS F:414 , ASP F:416 , ARG F:538BINDING SITE FOR RESIDUE MES F 806

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WE5)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Gly B:79 -Pro B:80
2Gly C:79 -Pro C:80
3Gly D:244 -Pro D:245

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WE5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WE5)

(-) Exons   (0, 0)

(no "Exon" information available for 1WE5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:772
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5a2 A:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5a4 A:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5a3 A:586-665 Putative glucosidase YicI, domain 3                           d1we5a1 A:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeeee..eeeeeee.....hhhhh.....eeeeeeeee..eeeeeee......................eeee...eeeeee..eeeeee.....eeeeee..eeeeeee...eeeeee....eeeeeeeee......eeeeee.........eeee..............eeeeeeee...eeeee.....eeeee......eeeeeee..eeeeeeee..hhhhhhhhhhhhhh.....hhhhh.eeee.......hhhhhhhhhhhhhh......eeeehhhhh................hhhhhhhhhhhhh.eeeeee..ee.....hhhhhhhhh....................ee....hhhhhhhhhhhhhhhhh....eeee................hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.........hhhhh..ee......hhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhh..eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeeeee.....eeeee.......ee....ee...eeee.....eeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 A   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510       520       530       540       550       560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            |                             32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE                                                                        569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                            1-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:760
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5b2 B:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5b4 B:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5b3 B:586-665 Putative glucosidase YicI, domain 3                           d1we5b1 B:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeee....eeeeee.....hhhhh.....eeeeeeeee..eeeeeee......................eeee...eeeeee..eeeeee.....eeeeee..eeeeeee....eeeee....eeeeeeeee......eeeee..........eeee...............eeeeeee...eeeee.....eeeee......eeeeee...eeeeeeee..hhhhhhhhhhhhhh.....hhhhh.eeee.......hhhhhhhhhhhhhh......eeeehhhhh................hhhhhhhhhhh...eeeeee..ee...hhhhhhhhhhh....................ee....hhhhhhhhhhhhhhhhhh...eeee................hhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eee.....hhhhh..ee......hhhhhhhhhhhhhhhhh.....ee..........hhhhhhhhhhhhhh...ee..------------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeeeee.....eeee.......ee.....eee..eeee.......eee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 B   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH------------DESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510       520       530       540         -  |    560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            1-MSE                         32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE                                           540          553             569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:756
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5c2 C:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5c4 C:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5c3 C:586-665 Putative glucosidase YicI, domain 3                           d1we5c1 C:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeeee..eeeeeee...............eeeeeeeee..eeeeeee.....................eeeee...eeeeee..eeeeee.....eeeeee..eeeeeee...eeeeee....eeeeeeeee......eeeee..........eeee...............eeeeeee...eeeee......eeee......eeeeee...eeeeeeee..hhhhhhhhhhhhhh.....hhhhh.eeee........hhhhhhhhhhhhhh.....eeeehhhhh................hhhhhhhhhhhh..eeeeee..ee.....hhhhhhhhh....................ee....hhhhhhhhhhhhhhhhhhh..eeee................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhh..ee......hhhhhhhhhhhhhhhhh.....eeee.----...hhhhhhhhhhhhhh..eee..------------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeeeee.....eeee.......eee.eeee......eeee.....eee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 C   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDI----NTAPAHVYKRWCAFGLLSSHSRLH------------DESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510 |    |520       530       540         -  |    560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            1-MSE                         32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE               512  517                    540          553             569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE                                                                                                                                                                               


Chain D from PDB  Type:PROTEIN  Length:757
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5d2 D:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5d4 D:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5d3 D:586-665 Putative glucosidase YicI, domain 3                           d1we5d1 D:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeee....eeeeee.....hhhhh.....eeeeeeeee..eeeeeee.....................eeeee...eeeeee..eeeeee.....eeeeee..eeeeeee....eeeee....eeeeeeeee......eeeeee.........eeee..............eeeeeeee...eeeee......eeee......eeeeee...eeeeeeee..hhhhhhhhhhhhhh.....hhhhh.eeee.hhhhh.hhhhhhhhhhhhhhh.....eeeehhhhh................hhhhhhhhhhh...eeeeee..ee.....hhhhhhhhh....................ee....hhhhhhhhhhhhhhhhhh...eeee................hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.........hhhhh..ee......hhhhhhhhhhhhhhhhh.....eeee.------.hhhhhhhhhhhhhh..eeeee..---------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeeeee.....eeeee..................eeee......eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 D   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDI------APAHVYKRWCAFGLLSSHSRLHGS---------DDESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510 |     520       530       540 |       - |     560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            1-MSE                         32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE               512    519                    542       552              569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE                                                                                                                                                                               


Chain E from PDB  Type:PROTEIN  Length:755
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5e2 E:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5e4 E:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5e3 E:586-665 Putative glucosidase YicI, domain 3                           d1we5e1 E:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeee....eeeeee...............eeeeee.....eeeeeee......................eeee...eeeeee..eeeeee.....eeeeee..eeeeeee....eeeee....eeeeeeeee......eeeee..........eeee...............eeeeeee....eeee.....eeeee......eeeeee...eeeeeee...hhhhhhhhhhhhhh.....hhhhh.eeee.......hhhhhhhhhhhhhhhhh...eeeehhhhh................hhhhhhhhhh....eeeeee..ee.....hhhhhhhhh....................ee....hhhhhhhhhhhhhhhhhh...eeee................hhhhhhhhhhhhhhhhhhhhhhh..hhhhh.........hhhhh..ee......hhhhhhhhhhhhhhhhhh....eeee.------.hhhhhhhhhhhhhh..eeee.-----------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeee.......eeeee..........eeee....eeeeee.....eee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 E   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDI------APAHVYKRWCAFGLLSSHSRLH-----------DDESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510 |     520       530       540         - |     560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            1-MSE                         32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE               512    519                  540         552              569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE                                                                                                                                                                               


Chain F from PDB  Type:PROTEIN  Length:757
 aligned with XYLS_ECOLI | P31434 from UniProtKB/Swiss-Prot  Length:772

    Alignment length:772
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
           XYLS_ECOLI     1 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
               SCOP domains d1we5f2 F:1-247 Putative glucosidase YicI, N-terminal domain                                                                                                                                                                                           d1we5f4 F:248-585 Putative glucosidase YicI, domain 2                                                                                                                                                                                                                                                                                             d1we5f3 F:586-665 Putative glucosidase YicI, domain 3                           d1we5f1 F:666-772 Putative glucosidase YicI, C-terminal domain                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee...eeee...eeeeeeee..eeeeeee.....hhhhh.....eeeeeeeee..eeeeeee.....................eeeee...eeeeee..eeeeee.....eeeeee..eeeeeee....eeeee....eeeeeeeee......eeeee..........eeee...............eeeeeee...eeeee.....eeeee......eeeeee...eeeeeeee..hhhhhhhhhhhhhh.....hhhhh.eeee.......hhhhhhhhhhhhhhh.....eeeehhhhh................hhhhhhhhhhhh..eeeeee..ee...hhhhhhhhhhh....................ee....hhhhhhhhhhhhhhhhhh...eeee................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhh..ee......hhhhhhhhhhhhhhhhh.....eeeee.-----.hhhhhhhhhhhhhh..eeeee.----------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhh..hhhhh.....eee...eee........eeeeee...eeee.....eee..eeeeee.......eee...eeeee...............eeeee......eeeeeee.....eeeeeeeeee..eeeeeeee.....eeeee.......ee.ee......eeeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1we5 F   1 mKISDGNWLIQPGLNLIHPLQVFEVEQQDNEmVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYmFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYmTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGmAERNLPLHVFHFDCFWmKAFQWCDFEWDPLTFPDPEGmIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAmGVDCFKTDFGERIPTDVQWFDGSDPQKmHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESmAESLRGGLSIGLSGFGFWSHDIG-----APAHVYKRWCAFGLLSSHSRLHG----------DDESCDVVRFFTQLKCRmmPYLYREAARANARGTPmmRAmmmEFPDDPACDYLDRQYmLGDNVmVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL 772
                            |       10        20        30 |      40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200|      210       220       230       240       250       260       270       280       290  |    300       310       320       330|      340       350       360       370       380       390       400       410       420       430     | 440       450       460       470       480       490       500       510  |    520       530       540|        - |     560       570       580      |590|||    600       610    |  620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770  
                            1-MSE                         32-MSE                                                                                                               150-MSE                                            201-MSE                                                                                     293-MSE          310-MSE              331-MSE                                                                      408-MSE                     436-MSE                                               490-MSE                513   519                   541        552              569-MSE           587-MSE||             609-MSE |                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   570-MSE           588-MSE|                   615-MSE                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        591-MSE                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         592-MSE                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          593-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 24)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1WE5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1WE5)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (XYLS_ECOLI | P31434)
molecular function
    GO:0061634    alpha-D-xyloside xylohydrolase    Catalysis of the hydrolysis of terminal, non-reducing alpha-D-xylose residues with release of alpha-D-xylose.
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0080176    xyloglucan 1,6-alpha-xylosidase activity    Catalysis of the hydrolysis of xyloglucan side chains so as to remove unsubstituted D-xylose residues attached to the glucose located at the non-reducing terminus.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    MES  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MSE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly B:79 - Pro B:80   [ RasMol ]  
    Gly C:79 - Pro C:80   [ RasMol ]  
    Gly D:244 - Pro D:245   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1we5
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  XYLS_ECOLI | P31434
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.-
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  XYLS_ECOLI | P31434
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        XYLS_ECOLI | P31434: 1xsi 1xsj 1xsk 2f2h

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1WE5)