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(-) Description

Title :  NMR STRUCTURE OF FASCICLIN-LIKE PROTEIN FROM RHODOBACTER SPHAEROIDES
 
Authors :  R. Moody, M. K. Phillips-Jones, M. P. Williamson
Date :  01 Sep 04  (Deposition) - 08 Mar 06  (Release) - 05 Feb 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A
NMR Structure *:  A  (1x)
Keywords :  Fasciclin, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. G. Moody, M. P. Williamson
Structure And Function Of A Bacterial Fasciclin I Domain Protein Elucidates Function Of Related Cell Adhesion Proteins Such As Tgfbip And Periostin.
Febs Open Bio V. 3 71 2013
PubMed-ID: 23772377  |  Reference-DOI: 10.1016/J.FOB.2013.01.001

(-) Compounds

Molecule 1 - BETA-IG-H3/FASCICLIN
    Atcc: NCIB 8253
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET14B
    Expression System Vector Type: PLASMID
    Organism Scientific: RHODOBACTER SPHAEROIDES
    Organism Taxid: 1063
    Synonym: FASCICLIN-LIKE PROTEIN

 Structural Features

(-) Chains, Units

  1
NMR Structure : A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1W7D)

(-) Sites  (0, 0)

(no "Site" information available for 1W7D)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1W7D)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1W7D)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1W7D)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1W7D)

(-) Exons   (0, 0)

(no "Exon" information available for 1W7D)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:137
 aligned with Q3IXZ6_RHOS4 | Q3IXZ6 from UniProtKB/TrEMBL  Length:156

    Alignment length:137
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       
         Q3IXZ6_RHOS4    20 ETGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTEGMTAETVEGGALTVTLEGGPKVNGVSISQPDVDASNGVIHVIDGVLMPGA 156
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------Fasciclin-1w7dA01 A:33-155                                                                                                 -- Pfam domains
         Sec.struct. author ....hhhhhhh.......hhhhhhh.hhhhhh...eeeeee.hhhhhhhh..hhhhhh.hhhhhhhhhhhhhhheeee.........eeeeee...eeeeeee....eee.eee.........eeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w7d A  21 ETGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTEGMTAETVEGGALTVTLEGGPKVNGVSISQPDVDASNGVIHVIDGVLMPGA 157
                                    30        40        50        60        70        80        90       100       110       120       130       140       150
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1W7D)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1W7D)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: Fasciclin] (5)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 1W7D)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q3IXZ6_RHOS4 | Q3IXZ6: 1w7e

(-) Related Entries Specified in the PDB File

1w7e NMR ENSEMBLE OF FASCICLIN-LIKE PROTEIN FROM RHODOBACTER SPHAEROIDES