1UP8 - JenaLib

Title :   RECOMBINANT VANADIUM-DEPENDENT BROMOPEROXIDASE FROM RED ALGAE CORALLINA PILULIFERA

Authors :   E. Garcia-Rodriguez, M. Isupov, T. Ohshiro, Y. Izumi, J. A. Littlechild

Date :   29 Sep 03 (Deposition) - 30 Sep 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.20

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D  (3x)

Keywords :   Haloperoxidase, Vanadate (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Garcia-Rodriguez, T. Ohshiro, T. Aibara, Y. Izumi, J. Littlechild
Enhancing Effect Of Calcium And Vanadium Ions On Thermal Stability Of Bromoperoxidase From Corallina Pilulifera.
J. Biol. Inorg. Chem. V. 10 275 2005
PubMed-ID: 15776268 | Reference-DOI: 10.1007/S00775-005-0639-3
(for further references see the PDB file header)

Compounds

Molecule 1 - VANADIUM-DEPENDENT BROMOPEROXIDASE 1
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	SACCHAROMYCES CEREVISIAE
	Expression System Plasmid	:	PTNT30
	Expression System Strain	:	BJ1991
	Expression System Taxid	:	4932
	Organism Scientific	:	CORALLINA PILULIFERA
	Organism Taxid	:	78447
	Synonym	:	VANADIUM BROMOPEROXIDASE

Structural Features

Chains, Units

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (3x)	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (2, 20)

Asymmetric Unit (2, 20)

No.	Name	Count	Type	Full Name
1	CA	4	Ligand/Ion	CALCIUM ION
2	PO4	16	Ligand/Ion	PHOSPHATE ION

Biological Unit 1 (1, 48)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	PO4	48	Ligand/Ion	PHOSPHATE ION

Sites (20, 20)

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LYS A:399 , ARG A:407 , PRO A:477 , HIS A:479 , SER A:484 , GLY A:485 , HIS A:486 , ARG A:546 , HIS A:552 , PO4 A:601	BINDING SITE FOR RESIDUE PO4 A 598
02	AC2	SOFTWARE	PHE A:360 , GLN A:362 , ASP A:364 , ASP A:367 , GLN A:369 , HOH A:2397	BINDING SITE FOR RESIDUE CA A 599
03	AC3	SOFTWARE	ARG A:216 , GLY A:217 , ASN A:223 , ILE A:228 , GLU A:233 , HOH A:2284 , HOH A:2555 , HOH A:2556	BINDING SITE FOR RESIDUE PO4 A 600
04	AC4	SOFTWARE	PRO A:477 , HIS A:479 , HIS A:486 , ARG A:546 , PO4 A:598 , HOH A:2421 , HOH A:2557 , HOH A:2558 , PHE B:372	BINDING SITE FOR RESIDUE PO4 A 601
05	AC5	SOFTWARE	ASN A:263 , ASP A:266 , ARG B:284 , GLY B:317	BINDING SITE FOR RESIDUE PO4 A 602
06	AC6	SOFTWARE	LYS B:399 , ARG B:407 , PRO B:477 , HIS B:479 , SER B:484 , GLY B:485 , HIS B:486 , ARG B:546 , HIS B:552 , PO4 B:601	BINDING SITE FOR RESIDUE PO4 B 598
07	AC7	SOFTWARE	PHE B:360 , GLN B:362 , ASP B:364 , ASP B:367 , GLN B:369 , HOH B:2431	BINDING SITE FOR RESIDUE CA B 599
08	AC8	SOFTWARE	GLY B:217 , GLU B:233 , HOH B:2309 , HOH B:2312 , HOH B:2604 , HOH B:2605 , HOH B:2606	BINDING SITE FOR RESIDUE PO4 B 600
09	AC9	SOFTWARE	PHE A:372 , GLU B:125 , PRO B:477 , HIS B:479 , HIS B:486 , ARG B:546 , PO4 B:598 , HOH B:2197 , HOH B:2455	BINDING SITE FOR RESIDUE PO4 B 601
10	BC1	SOFTWARE	ARG A:284 , ALA A:318 , ASN B:263 , ASP B:266 , GLU B:271	BINDING SITE FOR RESIDUE PO4 B 602
11	BC2	SOFTWARE	LYS C:399 , ARG C:407 , PRO C:477 , HIS C:479 , SER C:484 , GLY C:485 , HIS C:486 , ARG C:546 , HIS C:552 , PO4 C:601	BINDING SITE FOR RESIDUE PO4 C 598
12	BC3	SOFTWARE	PHE C:360 , GLN C:362 , ASP C:364 , ASP C:367 , GLN C:369 , HOH C:2409	BINDING SITE FOR RESIDUE CA C 599
13	BC4	SOFTWARE	GLY C:217 , ILE C:228 , GLU C:233 , HOH C:2293 , HOH C:2560 , HOH C:2561 , HOH C:2562	BINDING SITE FOR RESIDUE PO4 C 600
14	BC5	SOFTWARE	GLU C:125 , PRO C:477 , HIS C:479 , ARG C:546 , PO4 C:598 , HOH C:2563 , HOH C:2564 , HOH C:2565 , HOH C:2566 , PHE D:372	BINDING SITE FOR RESIDUE PO4 C 601
15	BC6	SOFTWARE	ASP C:266 , GLU C:271 , ARG D:284	BINDING SITE FOR RESIDUE PO4 C 602
16	BC7	SOFTWARE	LYS D:399 , ARG D:407 , PRO D:477 , HIS D:479 , SER D:484 , GLY D:485 , HIS D:486 , ARG D:546 , HIS D:552 , PO4 D:601 , HOH D:2592	BINDING SITE FOR RESIDUE PO4 D 598
17	BC8	SOFTWARE	PHE D:360 , GLN D:362 , ASP D:364 , ASP D:367 , GLN D:369 , HOH D:2424	BINDING SITE FOR RESIDUE CA D 599
18	BC9	SOFTWARE	ARG D:216 , GLY D:217 , ILE D:228 , GLU D:233 , HOH D:2308 , HOH D:2593 , HOH D:2594	BINDING SITE FOR RESIDUE PO4 D 600
19	CC1	SOFTWARE	PHE C:372 , PRO D:477 , HIS D:479 , ARG D:546 , PO4 D:598 , HOH D:2595 , HOH D:2596 , HOH D:2597	BINDING SITE FOR RESIDUE PO4 D 601
20	CC2	SOFTWARE	ARG C:284 , ASN D:263 , ASP D:266 , HOH D:2598	BINDING SITE FOR RESIDUE PO4 D 602

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:597
 aligned with PRXV_CORPI | O81959 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_CORPI     2 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAPQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1up8a_ A: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1up8A00 A:1-597 Vanadium-containing Chloroperoxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhh........hhhhhh.............................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhh.....ee..hhhhh....................hhhhhhhhhhhhhhhhh....hhhh.hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhh.......................hhhhh........eee..eee...hhhhhhh.eeee..eeee..eeee........hhhhhhhhhh.........eeeeee...hhhhhhhhhhhh..hhhhhhhhhhhhhh............hhhhhhee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhh.........eee......eee.......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up8 A   1 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 597
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590

Chain B from PDB  Type:PROTEIN  Length:597
 aligned with PRXV_CORPI | O81959 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_CORPI     2 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAPQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1up8b_ B: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1up8B00 B:1-597 Vanadium-containing Chloroperoxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.........hhhhhh.............................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhh.....ee..hhhhh....................hhhhhhhhhhhhhhhhh....hhhh.hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhh.......................hhhhh........eee..eee...hhhhhhh.eeee..eeee..eeee........hhhhhhhhhh.........eeeeee...hhhhhhhhhhhh..hhhhhhhhhhhhhh............hhhhhhee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhh.........eee......eee.......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up8 B   1 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 597
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590

Chain C from PDB  Type:PROTEIN  Length:597
 aligned with PRXV_CORPI | O81959 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_CORPI     2 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAPQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1up8c_ C: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1up8C00 C:1-597 Vanadium-containing Chloroperoxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhh........hhhhhh.............................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhh......ee..hhhhh....................hhhhhhhhhhhhhhhh.....hhhh.hhhhhhhhhhhhhhhh.hhhhhh......hhhhhhhh.......................hhhhh........eee..eee...hhhhhhh.eeee..eeee..eeee........hhhhhhhhhh.........eeeeee...hhhhhhhhhhhh..hhhhhhhhhhhhhh............hhhhhhee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhh.........eee......eee.......hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up8 C   1 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 597
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590

Chain D from PDB  Type:PROTEIN  Length:597
 aligned with PRXV_CORPI | O81959 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_CORPI     2 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAPQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1up8d_ D: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1up8D00 D:1-597 Vanadium-containing Chloroperoxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAP2-1up8D01 D:373-573                                                                                                                                                                                   ------------------------ Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAP2-1up8D02 D:373-573                                                                                                                                                                                   ------------------------ Pfam domains (2)
           Pfam domains (3) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAP2-1up8D03 D:373-573                                                                                                                                                                                   ------------------------ Pfam domains (3)
           Pfam domains (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAP2-1up8D04 D:373-573                                                                                                                                                                                   ------------------------ Pfam domains (4)
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhh........hhhhhh.............................hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhh.....ee..hhhhh....................hhhhhhhhhhhhhhhhh....hhhh.hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhh.......................hhhhh........eee..eee...hhhhhhh.eeee..eeee..eeee........hhhhhhhhhh.........eeeeee...hhhhhhhhhhhh..hhhhhhhhhhhhhh............hhhhhhee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhh.........eee......eee.......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up8 D   1 GIPADNLQSRAKASFDTRVAAAELALNRGVVPSFANGEELLYRNPDPDNTDPSFIASFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPETGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELVAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAQKGESIFPEVDLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 597
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (1, 4)

Pfam Domains (1, 4)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: pap2 (9)

Family: PAP2 (9)

Corallina pilulifera (Red coralline alga) (1)

1a	PAP2-1up8D01	D:373-573
1b	PAP2-1up8D02	D:373-573
1c	PAP2-1up8D03	D:373-573
1d	PAP2-1up8D04	D:373-573

Gene Ontology (5, 5)

Visualization

Interactive Views

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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