Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Biological Unit 1
(-)Biological Unit 2
(-)Biological Unit 3
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF TT1662 FROM THERMUS THERMOPHILUS
 
Authors :  K. Murayama, M. Shirouzu, T. Terada, S. Kuramitsu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  03 Jun 03  (Deposition) - 03 Dec 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Alpha-Beta Fold, Hydrolase, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. Murayama, M. Shirouzu, T. Terada, S. Kuramitsu, S. Yokoyama
Crystal Structure Of Tt1662 From Thermus Thermophilus Hb8: A Member Of The Alpha/Beta Hydrolase Fold Enzymes.
Proteins V. 58 982 2005
PubMed-ID: 15648092  |  Reference-DOI: 10.1002/PROT.20361
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN TT1662
    ChainsA, B, C, D, E, F
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET11A
    Expression System Taxid562
    Expression System Vector TypePLASMID
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid274

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)AB    
Biological Unit 2 (1x)  CD  
Biological Unit 3 (1x)    EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 24)

Asymmetric Unit (1, 24)
No.NameCountTypeFull Name
1MSE24Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1UFO)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1UFO)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Gly A:67 -Pro A:68
2Gly B:67 -Pro B:68
3Gly C:67 -Pro C:68
4Gly D:67 -Pro D:68
5Gly E:67 -Pro E:68

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1UFO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1UFO)

(-) Exons   (0, 0)

(no "Exon" information available for 1UFO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufoa_ A: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoA00 A:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..eeeeeeee....eeeeee.....hhhhhhhh...hhhh.eeeee...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo A   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            |                                                                                                                                          142-MSE                                          191-MSE                         223-MSE           
                            1-MSE                                                                                                                                                                                                                                         

Chain B from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufob_ B: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoB00 B:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..eeeeeee.....eeeeee.....hhhhhhhh...hhhh.eeeee...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo B   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            1-MSE                                                                                                                                      142-MSE                                          191-MSE                         223-MSE           

Chain C from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufoc_ C: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoC00 C:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..eeeeeeee....eeeeee.....hhhhhhhh...hhhh.eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo C   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            1-MSE                                                                                                                                      142-MSE                                          191-MSE                         223-MSE           

Chain D from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufod_ D: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoD00 D:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..eeeeeee.....eeeeee.....hhhhhhhh...hhhh.eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh....eeeeeee......hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo D   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            1-MSE                                                                                                                                      142-MSE                                          191-MSE                         223-MSE           

Chain E from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufoe_ E: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoE00 E:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..eeeeeeee....eeeeee.....hhhhhhhh...hhhh.eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo E   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            1-MSE                                                                                                                                      142-MSE                                          191-MSE                         223-MSE           

Chain F from PDB  Type:PROTEIN  Length:238
 aligned with P83821_THETH | P83821 from UniProtKB/TrEMBL  Length:238

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         P83821_THETH     1 MRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEAR 238
               SCOP domains d1ufof_ F: Hypothetical protein TT1662                                                                                                                                                                                                         SCOP domains
               CATH domains -1ufoF00 F:2-238  [code=3.40.50.1820, no name defined]                                                                                                                                                                                         CATH domains
           Pfam domains (1) -------------------------Abhydrolase_5-1ufoF01 F:26-218                                                                                                                                                                   -------------------- Pfam domains (1)
           Pfam domains (2) -------------------------Abhydrolase_5-1ufoF02 F:26-218                                                                                                                                                                   -------------------- Pfam domains (2)
           Pfam domains (3) -------------------------Abhydrolase_5-1ufoF03 F:26-218                                                                                                                                                                   -------------------- Pfam domains (3)
           Pfam domains (4) -------------------------Abhydrolase_5-1ufoF04 F:26-218                                                                                                                                                                   -------------------- Pfam domains (4)
           Pfam domains (5) -------------------------Abhydrolase_5-1ufoF05 F:26-218                                                                                                                                                                   -------------------- Pfam domains (5)
           Pfam domains (6) -------------------------Abhydrolase_5-1ufoF06 F:26-218                                                                                                                                                                   -------------------- Pfam domains (6)
         Sec.struct. author ...eeeeeee..eeeeeee.....eeeeee.....hhhhhhhh...hhhh.eeeee...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh......eeee................hhhhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ufo F   1 mRVRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPmKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARmEKTLEALRPHYPEGRLARFVEEGAGHTLTPLmARVGLAFLEHWLEAR 238
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140 |     150       160       170       180       190|      200       210       220  |    230        
                            1-MSE                                                                                                                                      142-MSE                                          191-MSE                         223-MSE           

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (P83821_THETH | P83821)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    MSE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
(no "Sites" information available for 1ufo)
 
  Cis Peptide Bonds
    Gly A:67 - Pro A:68   [ RasMol ]  
    Gly B:67 - Pro B:68   [ RasMol ]  
    Gly C:67 - Pro C:68   [ RasMol ]  
    Gly D:67 - Pro D:68   [ RasMol ]  
    Gly E:67 - Pro E:68   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1ufo
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  P83821_THETH | P83821
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  P83821_THETH | P83821
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1UFO)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1UFO)