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Title :   CRYSTAL STRUCTURE OF RHODANESE FROM THERMUS THERMOPHILUS HB8

Authors :   Y. Suzuki, Y. Kakuta, Riken Structural Genomics/Proteomics Initi (Rsgi)

Date :   17 Mar 03 (Deposition) - 21 Sep 04 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym./Biol. Unit : A

Keywords :   Rhodanese, Sulfurtransferase, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Suzuki, Y. Kakuta
Crystal Structure Of Rhodanese From Thermus Thermophilus Hb
To Be Published
PubMed: search

Molecule 1 - RHODANESE
	Chains	:	A
	EC Number	:	2.8.1.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 5)

No.	Name	Count	Type	Full Name
1	CSS	1	Mod. Amino Acid	S-MERCAPTOCYSTEINE
2	GOL	2	Ligand/Ion	GLYCEROL
3	MSE	2	Mod. Amino Acid	SELENOMETHIONINE

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TRP A:14 , HIS A:18 , ASP A:21 , THR A:81 , ARG A:109 , GLU A:120 , HOH A:1924 , HOH A:1930 , HOH A:1944 , HOH A:2082	BINDING SITE FOR RESIDUE GOL A 1901
2	AC2	SOFTWARE	VAL A:8 , LYS A:106 , ASP A:107 , GLU A:121 , ARG A:123 , HOH A:1906 , HOH A:1914 , HOH A:1970	BINDING SITE FOR RESIDUE GOL A 1902

(no "SS Bond" information available for 1UAR)

(no "Cis Peptide Bond" information available for 1UAR)

(no "SAP(SNP)/Variant" information available for 1UAR)

(no "PROSITE Motif" information available for 1UAR)

(no "Exon" information available for 1UAR)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:276
 aligned with Q5SJI0_THET8 | Q5SJI0 from UniProtKB/TrEMBL  Length:285

    Alignment length:284
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281    
         Q5SJI0_THET8     2 GYAHPEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE 285
               SCOP domains d1uara1 A:2-144 Sulfurtransferase                                                                                                              d1uara2 A:145-285 Sulfurtransferase                                                                                                           SCOP domains
               CATH domains 1uarA01 A:2-143 Oxidized Rhodanese, domain 1                                                                                                  1uarA02 A:144-285 Oxidized Rhodanese,         domain 1                                                                                         CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------Rhodanese-1uarA01 A:150-275                                                                                                   ---------- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Rhodanese-1uarA02 A:150-275                                                                                                   ---------- Pfam domains (2)
         Sec.struct. author ...hhh.eehhhhhhh......eeeeee....hhhhhh.....eeehhhhhhh........hhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhhh....eeee.hhhhhhhhhh....................hhh.eehhhhhhhhhhhhhh..eeeee..hhhhhh...--------............ee.hhhhhh.......hhhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhh......eeee.hhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uar A   2 GYAHPEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLmERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLmNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGEL--------EGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYcRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE 285
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171        |-       191       201       211       221       231       241       251       261       271       281    
                                                                                                71-MSE                                 111-MSE                                                              180      189                                                240-CSS

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Rhodanese/Cell cycle control phosphatase (39)

Superfamily: Rhodanese/Cell cycle control phosphatase (39)

Family: Multidomain sulfurtransferase (rhodanese) (14)

Protein domain: Sulfurtransferase (4)

Thermus thermophilus [TaxId: 274] (1)

1a	d1uara1	A:2-144
1b	d1uara2	A:145-285

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Oxidized Rhodanese; domain 1 (42)

Homologous Superfamily: Oxidized Rhodanese, domain 1 (42)

Thermus thermophilus. Organism_taxid: 274. (1)

1a	1uarA01	A:2-143
1b	1uarA02	A:144-285

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Rhodanese] (33)

Family: Rhodanese (33)

Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (1)

1a	Rhodanese-1uarA01	A:150-275
1b	Rhodanese-1uarA02	A:150-275

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (Q5SJI0_THET8 | Q5SJI0)

molecular function
	GO:0004792		thiosulfate sulfurtransferase activity		Catalysis of the reaction: hydrogen cyanide + thiosulfate = H(+) + sulfite + thiocyanate.
	GO:0016740		transferase activity		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

Asymmetric/Biological Unit
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