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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN RV1636 FROM MYCOBACTERIUM TUBERCULOSIS H37RV
 
Authors :  K. R. Rajashankar, R. Kniewel, V. Solorzano, C. D. Lima, S. K. Burley, Ne Sgx Research Center For Structural Genomics (Nysgxrc)
Date :  16 Jun 04  (Deposition) - 29 Jun 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F  (2x)
Keywords :  Hypotheticalprotein, Rv1636, Mtcy01B2. 28, Mt1672, Structural Genomics Target, T1533, Nysgxrc, Psi, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. R. Rajashankar, R. Kniewel, V. Solorzano, C. D. Lima
Crystal Structure Of Hypothetical Protein Rv1636 From Mycobacterium Tuberculosis H37Rv
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN RV1636
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET T7
    Expression System Strain: B834, DE3
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: RV1636
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 83332
    Strain: H37RV

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABCD  
Biological Unit 2 (2x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1TQ8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1TQ8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1TQ8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1TQ8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1TQ8)

(-) Exons   (0, 0)

(no "Exon" information available for 1TQ8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8a_ A: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8A00 A:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 A  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain A from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8a_ A: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8A00 A:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 A  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain B from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8b_ B: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8B00 B:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------.hhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 B  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain B from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8b_ B: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8B00 B:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------.hhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 B  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain C from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8c_ C: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8C00 C:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 C  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain C from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8c_ C: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8C00 C:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 C  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain D from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8d_ D: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8D00 D:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 D  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain D from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8d_ D: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8D00 D:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------..hhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 D  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain E from PDB  Type:PROTEIN  Length:126
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8e_ E: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8E00 E:13-159 Tyrosyl-Transfer RNA Synth                     etase , subunit E, domain 1                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...---------------------hhhhhhhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 E  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP---------------------APIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -    |   82        92       102       112       122       132       142       152       
                                             31-MSE                  55                    77                                                                                  


Chain E from PDB  Type:PROTEIN  Length:126
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8e_ E: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8E00 E:13-159 Tyrosyl-Transfer RNA Synth                     etase , subunit E, domain 1                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...---------------------hhhhhhhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 E  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP---------------------APIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -    |   82        92       102       112       122       132       142       152       
                                             31-MSE                  55                    77                                                                                  


Chain F from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTO | P9WFC8 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTO     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8f_ F: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8F00 F:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
           Pfam domains (1) ---Usp-1tq8F01 F:16-157                                                                                                                          -- Pfam domains (1)
           Pfam domains (2) ---Usp-1tq8F02 F:16-157                                                                                                                          -- Pfam domains (2)
           Pfam domains (3) ---Usp-1tq8F03 F:16-157                                                                                                                          -- Pfam domains (3)
           Pfam domains (4) ---Usp-1tq8F04 F:16-157                                                                                                                          -- Pfam domains (4)
           Pfam domains (5) ---Usp-1tq8F05 F:16-157                                                                                                                          -- Pfam domains (5)
           Pfam domains (6) ---Usp-1tq8F06 F:16-157                                                                                                                          -- Pfam domains (6)
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------.hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 F  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76                                                                                   


Chain F from PDB  Type:PROTEIN  Length:127
 aligned with Y1636_MYCTU | P9WFC9 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:147
                             1                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       
          Y1636_MYCTU     - -MSAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 146
               SCOP domains d1tq8f_ F: Hypothetical protein Rv1636                                                                                                              SCOP domains
               CATH domains 1tq8F00 F:13-159 Tyrosyl-Transfer RNA Synth                    etase , subunit E, domain 1                                                          CATH domains
           Pfam domains (1) ---Usp-1tq8F01 F:16-157                                                                                                                          -- Pfam domains (1)
           Pfam domains (2) ---Usp-1tq8F02 F:16-157                                                                                                                          -- Pfam domains (2)
           Pfam domains (3) ---Usp-1tq8F03 F:16-157                                                                                                                          -- Pfam domains (3)
           Pfam domains (4) ---Usp-1tq8F04 F:16-157                                                                                                                          -- Pfam domains (4)
           Pfam domains (5) ---Usp-1tq8F05 F:16-157                                                                                                                          -- Pfam domains (5)
           Pfam domains (6) ---Usp-1tq8F06 F:16-157                                                                                                                          -- Pfam domains (6)
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhhhh...eeeeeee...--------------------.hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhh...eeeee.....hhhhhhh.hhhhhhhhhh..eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tq8 F  13 SLSAYKTVVVGTDGSDSSmRAVDRAAQIAGADAKLIIASAYLP--------------------TAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT 159
                                    22        32        42        52  |      -         -   |    82        92       102       112       122       132       142       152       
                                             31-MSE                  55                   76
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: HUP (230)
(-)
Family: Usp (9)
(-)
Mycobacterium tuberculosis (1)
1aUsp-1tq8F01F:16-157
1bUsp-1tq8F02F:16-157
1cUsp-1tq8F03F:16-157
1dUsp-1tq8F04F:16-157
1eUsp-1tq8F05F:16-157
1fUsp-1tq8F06F:16-157

(-) Gene Ontology  (4, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Y1636_MYCTU | P9WFC9)
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
cellular component
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain A,B,C,D,E,F   (Y1636_MYCTO | P9WFC8)
biological process
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

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