Chain A from PDB Type:PROTEIN Length:426
aligned with TPL_CITFR | P31013 from UniProtKB/Swiss-Prot Length:456
Alignment length:456
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450
TPL_CITFR 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIYEPKQLRFFTARFDYI 456
SCOP domains d1tpla_ A: Tyrosine phenol-lyase SCOP domains
CATH domains 1tplA01 A:1-57,A:311-455 1tplA02 A:58-310 Type I PLP-dependent aspartate aminotransferase- like (Major domain) 1tplA01 A:1-57,A:311-455 Aspartate Aminotransferase, domain 1 - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ........eeeeee......hhhhhhhhhh.........................eeehhhhhh..........hhhhhhhhhhhhhh...eeeee...hhhhhhhhhhh.....eeee...---------....eeeee...................hhhhhhhhhh......eeeeeee...........hhhhhhhhhhhhh...eeeeee..hhhhhhhhhhh........hhhhhhhh....eeeeeee........eeeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eee.....eeeeeehhhh.........hhhhhhhhhhhhh....eee..---------------...eeeeee......hhhhhhhhhhhhhhh.............------......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1tpl A 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMY---------KNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGI---------------KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIY------FFTARFDYI 456
10 20 30 40 50 60 70 80 90 100 110 120 | - | 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 | - 400 410 420 430 440| 450
122 132 383 399 441 448
Chain A from PDB Type:PROTEIN Length:426
aligned with TPL_CITIN | P31012 from UniProtKB/Swiss-Prot Length:456
Alignment length:456
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450
TPL_CITIN 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIYEPKQLRFFTARFDYI 456
SCOP domains d1tpla_ A: Tyrosine phenol-lyase SCOP domains
CATH domains 1tplA01 A:1-57,A:311-455 1tplA02 A:58-310 Type I PLP-dependent aspartate aminotransferase- like (Major domain) 1tplA01 A:1-57,A:311-455 Aspartate Aminotransferase, domain 1 - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ........eeeeee......hhhhhhhhhh.........................eeehhhhhh..........hhhhhhhhhhhhhh...eeeee...hhhhhhhhhhh.....eeee...---------....eeeee...................hhhhhhhhhh......eeeeeee...........hhhhhhhhhhhhh...eeeeee..hhhhhhhhhhh........hhhhhhhh....eeeeeee........eeeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eee.....eeeeeehhhh.........hhhhhhhhhhhhh....eee..---------------...eeeeee......hhhhhhhhhhhhhhh.............------......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1tpl A 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMY---------KNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGI---------------KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIY------FFTARFDYI 456
10 20 30 40 50 60 70 80 90 100 110 120 | - | 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 | - 400 410 420 430 440| 450
122 132 383 399 441 448
Chain B from PDB Type:PROTEIN Length:426
aligned with TPL_CITFR | P31013 from UniProtKB/Swiss-Prot Length:456
Alignment length:456
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450
TPL_CITFR 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIYEPKQLRFFTARFDYI 456
SCOP domains d1tplb_ B: Tyrosine phenol-lyase SCOP domains
CATH domains 1tplB01 B:1-57,B:311-456 1tplB02 B:58-310 Type I PLP-dependent aspartate aminotransferase- like (Major domain) 1tplB01 B:1-57,B:311-456 Aspartate Aminotransferase, domain 1 CATH domains
Pfam domains (1) ---------------------------------------------Beta_elim_lyase-1tplB01 B:46-423 ------------------ ----------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------Beta_elim_lyase-1tplB02 B:46-423 ------------------ ----------- Pfam domains (2)
Sec.struct. author ........eeeeee......hhhhhhhhhh.........................eeehhhhhh..........hhhhhhhhhhhhhh...eeeee...hhhhhhhhhhh.....eeee...-----------..eeeee...................hhhhhhhhhh......eeeeeee...........hhhhhhhhhhhhh...eeeeee..hhhhhhhhhhh........hhhhhhhh....eeeeeee........eeeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eee.....eeeeeehhhh.........hhhhhhhhhhhhh....eee..---------------...eeeeee......hhhhhhhhhhhhhhh.............----........... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1tpl B 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMY-----------GAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGI---------------KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIY----LRFFTARFDYI 456
10 20 30 40 50 60 70 80 90 100 110 120 | - | 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 | - 400 410 420 430 440| | 450
122 134 383 399 441 446
Chain B from PDB Type:PROTEIN Length:426
aligned with TPL_CITIN | P31012 from UniProtKB/Swiss-Prot Length:456
Alignment length:456
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450
TPL_CITIN 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIYEPKQLRFFTARFDYI 456
SCOP domains d1tplb_ B: Tyrosine phenol-lyase SCOP domains
CATH domains 1tplB01 B:1-57,B:311-456 1tplB02 B:58-310 Type I PLP-dependent aspartate aminotransferase- like (Major domain) 1tplB01 B:1-57,B:311-456 Aspartate Aminotransferase, domain 1 CATH domains
Pfam domains (1) ---------------------------------------------Beta_elim_lyase-1tplB01 B:46-423 ------------------ ----------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------Beta_elim_lyase-1tplB02 B:46-423 ------------------ ----------- Pfam domains (2)
Sec.struct. author ........eeeeee......hhhhhhhhhh.........................eeehhhhhh..........hhhhhhhhhhhhhh...eeeee...hhhhhhhhhhh.....eeee...-----------..eeeee...................hhhhhhhhhh......eeeeeee...........hhhhhhhhhhhhh...eeeeee..hhhhhhhhhhh........hhhhhhhh....eeeeeee........eeeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eee.....eeeeeehhhh.........hhhhhhhhhhhhh....eee..---------------...eeeeee......hhhhhhhhhhhhhhh.............----........... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1tpl B 1 MNYPAEPFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMY-----------GAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGI---------------KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLKFIY----LRFFTARFDYI 456
10 20 30 40 50 60 70 80 90 100 110 120 | - | 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 | - 400 410 420 430 440| | 450
122 134 383 399 441 446
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |