1T5A - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   HUMAN PYRUVATE KINASE M2

Authors :   J. D. Dombrauckas, B. D. Santarsiero, A. D. Mesecar

Date :   03 May 04 (Deposition) - 12 Jul 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D  (1x)
Biol. Unit 2: A (1x),B (1x),C (1x),D (1x)

Keywords :   Alpha8-Beta8 Barrel, Beta Sheets, Alpha Helices, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. D. Dombrauckas, B. D. Santarsiero, A. D. Mesecar
Structural Basis For Tumor Pyruvate Kinase M2 Allosteric Regulation And Catalysis.
Biochemistry V. 44 9417 2005
PubMed-ID: 15996096 | Reference-DOI: 10.1021/BI0474923

Molecule 1 - PYRUVATE KINASE, M2 ISOZYME
	Chains	:	A, B, C, D
	EC Number	:	2.7.1.40
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PJDAM-HIS
	Expression System Strain	:	ROSETTA BL21(DE3)PLYSS
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	PKM2, PKM
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B	C	D
Biological Unit 2 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 40)

No.	Name	Count	Type	Full Name
1	FBP	4	Ligand/Ion	BETA-FRUCTOSE-1,6-DIPHOSPHATE
2	GOL	20	Ligand/Ion	GLYCEROL
3	K	4	Ligand/Ion	POTASSIUM ION
4	MG	4	Ligand/Ion	MAGNESIUM ION
5	OXL	4	Ligand/Ion	OXALATE ION
6	PO4	4	Ligand/Ion	PHOSPHATE ION

Biological Unit 1 (4, 32)

No.	Name	Count	Type	Full Name
1	FBP	4	Ligand/Ion	BETA-FRUCTOSE-1,6-DIPHOSPHATE
2	GOL	20	Ligand/Ion	GLYCEROL
3	K	-1	Ligand/Ion	POTASSIUM ION
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	OXL	4	Ligand/Ion	OXALATE ION
6	PO4	4	Ligand/Ion	PHOSPHATE ION

Biological Unit 2 (4, 17)

No.	Name	Count	Type	Full Name
1	FBP	2	Ligand/Ion	BETA-FRUCTOSE-1,6-DIPHOSPHATE
2	GOL	11	Ligand/Ion	GLYCEROL
3	K	-1	Ligand/Ion	POTASSIUM ION
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	OXL	2	Ligand/Ion	OXALATE ION
6	PO4	2	Ligand/Ion	PHOSPHATE ION

Asymmetric Unit (40, 40)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LEU A:431 , THR A:432 , LYS A:433 , SER A:434 , SER A:437 , TRP A:482 , ARG A:489 , GLY A:514 , ARG A:516 , PRO A:517 , GLY A:518 , SER A:519 , GLY A:520 , PHE A:521 , HOH A:731	BINDING SITE FOR RESIDUE FBP A 532
02	AC2	SOFTWARE	LEU B:431 , THR B:432 , LYS B:433 , SER B:434 , SER B:437 , TRP B:482 , ARG B:489 , GLY B:514 , ARG B:516 , PRO B:517 , GLY B:518 , SER B:519 , GLY B:520 , PHE B:521 , HOH B:721	BINDING SITE FOR RESIDUE FBP B 532
03	AC3	SOFTWARE	LEU C:431 , THR C:432 , LYS C:433 , SER C:434 , SER C:437 , TRP C:482 , ARG C:489 , GLY C:514 , ARG C:516 , PRO C:517 , GLY C:518 , SER C:519 , GLY C:520 , PHE C:521	BINDING SITE FOR RESIDUE FBP C 532
04	AC4	SOFTWARE	LEU D:431 , THR D:432 , LYS D:433 , SER D:434 , SER D:437 , TRP D:482 , ARG D:489 , GLY D:514 , ARG D:516 , PRO D:517 , GLY D:518 , SER D:519 , GLY D:520 , PHE D:521 , HOH D:720	BINDING SITE FOR RESIDUE FBP D 532
05	AC5	SOFTWARE	LYS A:270 , GLU A:272 , ALA A:293 , ARG A:294 , GLY A:295 , ASP A:296 , THR A:328 , MET A:360 , MG A:601 , HOH A:727	BINDING SITE FOR RESIDUE OXL A 533
06	AC6	SOFTWARE	LYS B:270 , GLU B:272 , ALA B:293 , ARG B:294 , GLY B:295 , ASP B:296 , THR B:328 , MG B:602 , HOH B:719	BINDING SITE FOR RESIDUE OXL B 533
07	AC7	SOFTWARE	LYS C:270 , GLU C:272 , ALA C:293 , GLY C:295 , ASP C:296 , THR C:328 , MG C:603 , HOH C:722	BINDING SITE FOR RESIDUE OXL C 533
08	AC8	SOFTWARE	LYS D:270 , GLU D:272 , ALA D:293 , GLY D:295 , ASP D:296 , THR D:328 , MG D:604 , HOH D:718	BINDING SITE FOR RESIDUE OXL D 533
09	AC9	SOFTWARE	HIS A:78 , ARG A:120	BINDING SITE FOR RESIDUE PO4 A 534
10	BC1	SOFTWARE	ASN B:75 , HIS B:78 , ARG B:120	BINDING SITE FOR RESIDUE PO4 B 534
11	BC2	SOFTWARE	HIS C:78 , ARG C:120	BINDING SITE FOR RESIDUE PO4 C 534
12	BC3	SOFTWARE	ARG D:120	BINDING SITE FOR RESIDUE PO4 D 534
13	BC4	SOFTWARE	GLU A:272 , ASP A:296 , OXL A:533 , HOH A:729	BINDING SITE FOR RESIDUE MG A 601
14	BC5	SOFTWARE	GLU B:272 , ASP B:296 , OXL B:533	BINDING SITE FOR RESIDUE MG B 602
15	BC6	SOFTWARE	LYS C:270 , GLU C:272 , ASP C:296 , OXL C:533	BINDING SITE FOR RESIDUE MG C 603
16	BC7	SOFTWARE	GLU D:272 , ASP D:296 , OXL D:533	BINDING SITE FOR RESIDUE MG D 604
17	BC8	SOFTWARE	ASN A:75 , SER A:77 , ASP A:113 , THR A:114 , SER A:243	BINDING SITE FOR RESIDUE K A 701
18	BC9	SOFTWARE	ASN B:75 , SER B:77 , ASP B:113 , THR B:114 , HOH B:723	BINDING SITE FOR RESIDUE K B 702
19	CC1	SOFTWARE	ASN C:75 , SER C:77 , ASP C:113 , THR C:114	BINDING SITE FOR RESIDUE K C 703
20	CC2	SOFTWARE	ASN D:75 , SER D:77 , ASP D:113 , THR D:114	BINDING SITE FOR RESIDUE K D 704
21	CC3	SOFTWARE	HIS A:78	BINDING SITE FOR RESIDUE GOL A 702
22	CC4	SOFTWARE	HIS B:78 , LYS B:206	BINDING SITE FOR RESIDUE GOL B 703
23	CC5	SOFTWARE	HIS C:78 , LYS C:206	BINDING SITE FOR RESIDUE GOL C 704
24	CC6	SOFTWARE	HIS D:78 , GLY D:79	BINDING SITE FOR RESIDUE GOL D 705
25	CC7	SOFTWARE	TRP A:482 , ASP A:487 , THR A:513 , GLY A:514	BINDING SITE FOR RESIDUE GOL A 703
26	CC8	SOFTWARE	ALA B:483 , VAL B:486 , ASP B:487	BINDING SITE FOR RESIDUE GOL B 704
27	CC9	SOFTWARE	TRP C:482 , THR C:513 , ARG C:526	BINDING SITE FOR RESIDUE GOL C 705
28	DC1	SOFTWARE	VAL D:486 , ASP D:487 , THR D:513 , GLY D:514 , ARG D:526	BINDING SITE FOR RESIDUE GOL D 706
29	DC2	SOFTWARE	PRO D:117 , ASN D:210 , LEU D:211 , VAL D:216 , PHE D:244 , GLU D:300	BINDING SITE FOR RESIDUE GOL D 707
30	DC3	SOFTWARE	PRO C:117 , VAL C:209 , ASN C:210 , LEU C:211 , VAL C:216 , PHE C:244 , GLU C:300	BINDING SITE FOR RESIDUE GOL C 706
31	DC4	SOFTWARE	CYS C:317 , ASN C:318 , GLY C:321 , LYS C:322 , ASP C:357 , ARG C:443 , ARG C:445 , TYR C:466	BINDING SITE FOR RESIDUE GOL C 707
32	DC5	SOFTWARE	PRO A:117 , GLU A:118 , VAL A:216 , GLU A:300	BINDING SITE FOR RESIDUE GOL A 704
33	DC6	SOFTWARE	ARG A:106 , ASN A:379	BINDING SITE FOR RESIDUE GOL A 705
34	DC7	SOFTWARE	LYS B:66 , ARG B:106	BINDING SITE FOR RESIDUE GOL B 705
35	DC8	SOFTWARE	ARG C:43 , LYS C:66 , SER C:67 , GLY C:68 , ARG C:106 , ASN C:379	BINDING SITE FOR RESIDUE GOL C 708
36	DC9	SOFTWARE	LYS D:66 , SER D:67 , GLY D:68 , ARG D:106	BINDING SITE FOR RESIDUE GOL D 708
37	EC1	SOFTWARE	GLU A:285 , SER A:287 , LYS A:322 , LYS B:125 , SER B:127 , ALA B:130	BINDING SITE FOR RESIDUE GOL A 706
38	EC2	SOFTWARE	ARG B:255 , GLU B:285 , ALA B:286	BINDING SITE FOR RESIDUE GOL B 706
39	EC3	SOFTWARE	GLU C:285 , SER C:287 , ASP C:288 , LYS C:322	BINDING SITE FOR RESIDUE GOL C 709
40	EC4	SOFTWARE	GLU D:285 , ALA D:286 , LYS D:322	BINDING SITE FOR RESIDUE GOL D 709

(no "SS Bond" information available for 1T5A)

(no "Cis Peptide Bond" information available for 1T5A)

Asymmetric Unit (1, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_033067	G	204	V	KPYM_HUMAN	Polymorphism	17853396	A/B/C/D	G	204	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (1, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_033067	G	204	V	KPYM_HUMAN	Polymorphism	17853396	A/B/C/D	G	204	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (1, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_033067	G	204	V	KPYM_HUMAN	Polymorphism	17853396	A/B/C/D	G	204	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PYRUVATE_KINASE	PS00110	Pyruvate kinase active site signature.	KPYM_HUMAN	265-277	4	A:265-277 B:265-277 C:265-277 D:265-277

Biological Unit 1 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PYRUVATE_KINASE	PS00110	Pyruvate kinase active site signature.	KPYM_HUMAN	265-277	4	A:265-277 B:265-277 C:265-277 D:265-277

Biological Unit 2 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PYRUVATE_KINASE	PS00110	Pyruvate kinase active site signature.	KPYM_HUMAN	265-277	4	A:265-277 B:265-277 C:265-277 D:265-277

Asymmetric Unit (10, 40)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENST00000335181	1a	ENSE00001360078	chr15:72523684-72523457	228	KPYM_HUMAN	-	0	0	-	-
1.3a	ENST00000335181	3a	ENSE00001730487	chr15:72511451-72511285	167	KPYM_HUMAN	1-52	52	4	A:13-52 B:13-52 C:13-52 D:13-52	40 40 40 40
1.4b	ENST00000335181	4b	ENSE00000374128	chr15:72509841-72509750	92	KPYM_HUMAN	52-82	31	4	A:52-82 B:52-82 C:52-82 D:52-82	31 31 31 31
1.5b	ENST00000335181	5b	ENSE00000943411	chr15:72502819-72502688	132	KPYM_HUMAN	83-126	44	4	A:83-126 B:83-126 C:83-126 D:83-126	44 44 44 44
1.6a	ENST00000335181	6a	ENSE00000943412	chr15:72502200-72502014	187	KPYM_HUMAN	127-189	63	4	A:127-189 B:127-189 C:127-189 D:127-189	63 63 63 63
1.7a	ENST00000335181	7a	ENSE00001504881	chr15:72501232-72500962	271	KPYM_HUMAN	189-279	91	4	A:189-279 B:189-279 C:189-279 D:189-279	91 91 91 91
1.8	ENST00000335181	8	ENSE00001179435	chr15:72499618-72499468	151	KPYM_HUMAN	279-329	51	4	A:279-329 B:279-329 C:279-329 D:279-329	51 51 51 51
1.9	ENST00000335181	9	ENSE00001220626	chr15:72499221-72499069	153	KPYM_HUMAN	330-380	51	4	A:330-380 B:330-380 C:330-380 D:330-380	51 51 51 51
1.11	ENST00000335181	11	ENSE00001220667	chr15:72494961-72494795	167	KPYM_HUMAN	381-436	56	4	A:381-436 B:381-436 C:381-436 D:381-436	56 56 56 56
1.12	ENST00000335181	12	ENSE00001220742	chr15:72492996-72492815	182	KPYM_HUMAN	436-497	62	4	A:436-497 B:436-497 C:436-497 D:436-497	62 62 62 62
1.13b	ENST00000335181	13b	ENSE00001179472	chr15:72492097-72491370	728	KPYM_HUMAN	497-531	35	4	A:497-531 B:497-531 C:497-531 D:497-531	35 35 35 35

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:519
 aligned with KPYM_HUMAN | P14618 from UniProtKB/Swiss-Prot  Length:531

    Alignment length:519
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522         
           KPYM_HUMAN    13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1t5aA01 A:13-42,A:386-531     1t5aA02 A:43-116,A:220-385 Phosphoenolpyruvate-binding domains            1t5aA03 A:117-219 M1 Pyruvate Kinase; Domain 3                                                         1t5aA02 A:43-116,A:220-385 Phosphoenolpyruvate-binding domains                                                                                                        1t5aA01 A:13-42,A:386-531  [code=3.40.1380.20, no name defined]                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..hhhhhhhh.............eeeee......hhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhhh...........eeeee.....ee...........eee....eeeee.hhhhh......eee...hhhhhh.....eeee....eeeeeeee...eeeeeeee.eee....eee...........hhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhh....hhhhhhhhhhhhhhh..eeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhh.....eeeee.hhhhhhhhhhh..eeeee.......hhhhhhhhhhhhhhhhhhhh.......eeeeeee.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYRUVATE_KINA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: A:13-52 UniProt: 1-52   ------------------------------Exon 1.5b  PDB: A:83-126 UniProt: 83-126    Exon 1.6a  PDB: A:127-189 UniProt: 127-189                     -----------------------------------------------------------------------------------------Exon 1.8  PDB: A:279-329 UniProt: 279-329          Exon 1.9  PDB: A:330-380 UniProt: 330-380          Exon 1.11  PDB: A:381-436 UniProt: 381-436              ------------------------------------------------------------Exon 1.13b  PDB: A:497-531          Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.4b  PDB: A:52-82        ----------------------------------------------------------------------------------------------------------Exon 1.7a  PDB: A:189-279 UniProt: 189-279                                                 ------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12  PDB: A:436-497 UniProt: 436-497                    ---------------------------------- Transcript 1 (2)
                 1t5a A  13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQNLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522

Chain B from PDB  Type:PROTEIN  Length:519
 aligned with KPYM_HUMAN | P14618 from UniProtKB/Swiss-Prot  Length:531

    Alignment length:519
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522         
           KPYM_HUMAN    13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1t5aB01 B:13-42,B:386-531     1t5aB02 B:43-116,B:220-385 Phosphoenolpyruvate-binding domains            1t5aB03 B:117-219 M1 Pyruvate Kinase; Domain 3                                                         1t5aB02 B:43-116,B:220-385 Phosphoenolpyruvate-binding domains                                                                                                        1t5aB01 B:13-42,B:386-531  [code=3.40.1380.20, no name defined]                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..hhhhhhhh.............eeeee......hhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhhh...........eeeee.....ee...........eee....eeeee.hhhhh......eee...hhhhhh.....eeee....eeeeeeee...eeeeeeee.eee....eee...........hhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhh....hhhhhhhhhhhhhhh..eeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhh......eeeee.hhhhhhhhhhh..eeeee.......hhhhhhhhhhhhhhhhhhhh.......eeeeeee.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYRUVATE_KINA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: B:13-52 UniProt: 1-52   ------------------------------Exon 1.5b  PDB: B:83-126 UniProt: 83-126    Exon 1.6a  PDB: B:127-189 UniProt: 127-189                     -----------------------------------------------------------------------------------------Exon 1.8  PDB: B:279-329 UniProt: 279-329          Exon 1.9  PDB: B:330-380 UniProt: 330-380          Exon 1.11  PDB: B:381-436 UniProt: 381-436              ------------------------------------------------------------Exon 1.13b  PDB: B:497-531          Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.4b  PDB: B:52-82        ----------------------------------------------------------------------------------------------------------Exon 1.7a  PDB: B:189-279 UniProt: 189-279                                                 ------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12  PDB: B:436-497 UniProt: 436-497                    ---------------------------------- Transcript 1 (2)
                 1t5a B  13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQNLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522

Chain C from PDB  Type:PROTEIN  Length:519
 aligned with KPYM_HUMAN | P14618 from UniProtKB/Swiss-Prot  Length:531

    Alignment length:519
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522         
           KPYM_HUMAN    13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1t5aC01 C:13-42,C:386-531     1t5aC02 C:43-116,C:220-385 Phosphoenolpyruvate-binding domains            1t5aC03 C:117-219 M1 Pyruvate Kinase; Domain 3                                                         1t5aC02 C:43-116,C:220-385 Phosphoenolpyruvate-binding domains                                                                                                        1t5aC01 C:13-42,C:386-531  [code=3.40.1380.20, no name defined]                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..hhhhhhhhh............eeeee......hhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhhh...........eeeee.....ee...........eee....eeeee.hhhhh......eee...hhhhhh.....eeee....eeeeeeee...eeeeeeee.eee....eee...........hhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhh....hhhhhhhhhhhhhhh..eeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhh......eeeee.hhhhhhhhhhh..eeeee.......hhhhhhhhhhhhhhhhhhhh.......eeeeeee.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYRUVATE_KINA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: C:13-52 UniProt: 1-52   ------------------------------Exon 1.5b  PDB: C:83-126 UniProt: 83-126    Exon 1.6a  PDB: C:127-189 UniProt: 127-189                     -----------------------------------------------------------------------------------------Exon 1.8  PDB: C:279-329 UniProt: 279-329          Exon 1.9  PDB: C:330-380 UniProt: 330-380          Exon 1.11  PDB: C:381-436 UniProt: 381-436              ------------------------------------------------------------Exon 1.13b  PDB: C:497-531          Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.4b  PDB: C:52-82        ----------------------------------------------------------------------------------------------------------Exon 1.7a  PDB: C:189-279 UniProt: 189-279                                                 ------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12  PDB: C:436-497 UniProt: 436-497                    ---------------------------------- Transcript 1 (2)
                 1t5a C  13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQNLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522

Chain D from PDB  Type:PROTEIN  Length:519
 aligned with KPYM_HUMAN | P14618 from UniProtKB/Swiss-Prot  Length:531

    Alignment length:519
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522         
           KPYM_HUMAN    13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1t5aD01 D:13-42,D:386-531     1t5aD02 D:43-116,D:220-385 Phosphoenolpyruvate-binding domains            1t5aD03 D:117-219 M1 Pyruvate Kinase; Domain 3                                                         1t5aD02 D:43-116,D:220-385 Phosphoenolpyruvate-binding domains                                                                                                        1t5aD01 D:13-42,D:386-531  [code=3.40.1380.20, no name defined]                                                                                    CATH domains
           Pfam domains (1) -----------------------------PK-1t5aD01 D:42-395                                                                                                                                                                                                                                                                                                                                               -------------PK_C-1t5aD05 D:409-529                                                                                                   -- Pfam domains (1)
           Pfam domains (2) -----------------------------PK-1t5aD02 D:42-395                                                                                                                                                                                                                                                                                                                                               -------------PK_C-1t5aD06 D:409-529                                                                                                   -- Pfam domains (2)
           Pfam domains (3) -----------------------------PK-1t5aD03 D:42-395                                                                                                                                                                                                                                                                                                                                               -------------PK_C-1t5aD07 D:409-529                                                                                                   -- Pfam domains (3)
           Pfam domains (4) -----------------------------PK-1t5aD04 D:42-395                                                                                                                                                                                                                                                                                                                                               -------------PK_C-1t5aD08 D:409-529                                                                                                   -- Pfam domains (4)
         Sec.struct. author ....hhhhhh..hhhhhhhhh............eeeee......hhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhhh...........eeeee..................eee....eeeee.hhhhh......eee...hhhhhh.....eeee....eeeeeeee...eeeeeeee.eee.....ee...........hhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhh....hhhhhhhhhhhhhhh..eeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhh......eeeee.hhhhhhhhhhh..eeeee.......hhhhhhhhhhhhhhhhhhhh.......eeeeeee.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYRUVATE_KINA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: D:13-52 UniProt: 1-52   ------------------------------Exon 1.5b  PDB: D:83-126 UniProt: 83-126    Exon 1.6a  PDB: D:127-189 UniProt: 127-189                     -----------------------------------------------------------------------------------------Exon 1.8  PDB: D:279-329 UniProt: 279-329          Exon 1.9  PDB: D:330-380 UniProt: 330-380          Exon 1.11  PDB: D:381-436 UniProt: 381-436              ------------------------------------------------------------Exon 1.13b  PDB: D:497-531          Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.4b  PDB: D:52-82        ----------------------------------------------------------------------------------------------------------Exon 1.7a  PDB: D:189-279 UniProt: 189-279                                                 ------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.12  PDB: D:436-497 UniProt: 436-497                    ---------------------------------- Transcript 1 (2)
                 1t5a D  13 IQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQNLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 1T5A)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Pyruvate Kinase; Chain: A, domain 1 (36)

Homologous Superfamily: [code=3.40.1380.20, no name defined] (20)

Human (Homo sapiens) (6)

1a	1t5aA01	A:13-42,A:386-531
1b	1t5aB01	B:13-42,B:386-531
1c	1t5aC01	C:13-42,C:386-531
1d	1t5aD01	D:13-42,D:386-531

Architecture: Alpha-Beta Barrel (2994)

Topology: TIM Barrel (2806)

Homologous Superfamily: Phosphoenolpyruvate-binding domains (67)

Human (Homo sapiens) (6)

2a	1t5aA02	A:43-116,A:220-385
2b	1t5aB02	B:43-116,B:220-385
2c	1t5aC02	C:43-116,C:220-385
2d	1t5aD02	D:43-116,D:220-385

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: M1 Pyruvate Kinase; Domain 3 (24)

Homologous Superfamily: M1 Pyruvate Kinase; Domain 3 (20)

Human (Homo sapiens) (6)

3a	1t5aA03	A:117-219
3b	1t5aB03	B:117-219
3c	1t5aC03	C:117-219
3d	1t5aD03	D:117-219

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: PK_TIM (63)

Family: PK (17)

Homo sapiens (Human) (7)

1a	PK-1t5aD01	D:42-395
1b	PK-1t5aD02	D:42-395
1c	PK-1t5aD03	D:42-395
1d	PK-1t5aD04	D:42-395

Clan: no clan defined [family: PK_C] (19)

Family: PK_C (19)

Homo sapiens (Human) (7)

2a	PK_C-1t5aD05	D:409-529
2b	PK_C-1t5aD06	D:409-529
2c	PK_C-1t5aD07	D:409-529
2d	PK_C-1t5aD08	D:409-529

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (KPYM_HUMAN | P14618)

molecular function
	GO:0043531	ADP binding	Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0023026	MHC class II protein complex binding	Interacting selectively and non-covalently with the class II major histocompatibility complex.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0030955	potassium ion binding	Interacting selectively and non-covalently with potassium (K+) ions.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004743	pyruvate kinase activity	Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0006754	ATP biosynthetic process	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0031100	animal organ regeneration	The regrowth of a lost or destroyed animal organ.
	GO:0061621	canonical glycolysis	The glycolytic process that begins with the conversion of glucose to glucose-6-phosphate by glucokinase activity. Glycolytic processes are the chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.
	GO:0006006	glucose metabolic process	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0001889	liver development	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0012501	programmed cell death	A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell.
	GO:0042866	pyruvate biosynthetic process	The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate.
	GO:0009629	response to gravity	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.
	GO:0001666	response to hypoxia	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
	GO:0032868	response to insulin	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.
	GO:0014870	response to muscle inactivity	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.
	GO:0007584	response to nutrient	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.
	GO:0010033	response to organic substance	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.
	GO:0043403	skeletal muscle tissue regeneration	The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.
cellular component
	GO:0005929	cilium	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0031012	extracellular matrix	A structure lying external to one or more cells, which provides structural support for cells or tissues.
	GO:1903561	extracellular vesicle	Any vesicle that is part of the extracellular region.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0043209	myelin sheath	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0031982	vesicle	Any small, fluid-filled, spherical organelle enclosed by membrane.

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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1t5a)

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	1t5a
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	2.7.1.40
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	KPYM_HUMAN \| P14618
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

(no "Related Entries Specified in the PDB File" available for 1T5A)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 40)

Sites (40, 40)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 4)

PROSITE Motifs (1, 4)

Exons (10, 40)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (3, 12)

Pfam Domains (2, 8)

Gene Ontology (40, 40)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File